RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 LRPPRCP42704 1394 aaKnown RBP8.1□□□□□ -1.11
LINC00458-201ENST00000423442 SPATA31A3Q5VYP0 1347 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 TMEM238LA0A1B0GVL6 79 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 NETO1Q8TDF5 533 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 FAM129BQ96TA1 746 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 DISC1Q9NRI5 854 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 PLCH1Q4KWH8 1693 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 CDC42BPGQ6DT37 1551 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 ANKRD30BQ9BXX2 1392 aa8.1□□□□□ -1.11
LINC00458-201ENST00000423442 RGPD1P0DJD0 1748 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 BIN1O00499 593 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 NDUFB5O43674 189 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 GADD45BO75293 160 aaPredicted RBP8.09□□□□□ -1.11
LINC00458-201ENST00000423442 LEFTY1O75610 366 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 FUT4P22083 530 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 ID3Q02535 119 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 ZNF124Q15973 351 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
LINC00458-201ENST00000423442 SMYD4Q8IYR2 804 aaPredicted RBP8.09□□□□□ -1.11
LINC00458-201ENST00000423442 MISP3Q96FF7 219 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 ATXN3LQ9H3M9 355 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 RC3H2Q9HBD1 1191 aaKnown RBP8.09□□□□□ -1.11
LINC00458-201ENST00000423442 MBNL3Q9NUK0 354 aaKnown RBP8.09□□□□□ -1.11
LINC00458-201ENST00000423442 ADAMTS6Q9UKP5 1117 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 PRAG1Q86YV5 1406 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 NWD2Q9ULI1 1742 aa8.09□□□□□ -1.11
LINC00458-201ENST00000423442 EIF1AYO14602 144 aaKnown RBP8.08□□□□□ -1.12
LINC00458-201ENST00000423442 RNASE1P07998 156 aaKnown RBP8.08□□□□□ -1.12
LINC00458-201ENST00000423442 SLFN14P0C7P3 912 aa8.08□□□□□ -1.12
LINC00458-201ENST00000423442 HCLS1P14317 486 aaPredicted RBP8.08□□□□□ -1.12
LINC00458-201ENST00000423442 PDE3BQ13370 1112 aa8.08□□□□□ -1.12
LINC00458-201ENST00000423442 TTLL4Q14679 1199 aa8.08□□□□□ -1.12
LINC00458-201ENST00000423442 EZH2Q15910 746 aaKnown RBP8.08□□□□□ -1.12
LINC00458-201ENST00000423442 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
LINC00458-201ENST00000423442 KRT28Q7Z3Y7 464 aa8.08□□□□□ -1.12
LINC00458-201ENST00000423442 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
LINC00458-201ENST00000423442 STK26Q9P289 416 aa8.08□□□□□ -1.12
LINC00458-201ENST00000423442 PCDHGC5Q9Y5F6 944 aa8.08□□□□□ -1.12
LINC00458-201ENST00000423442 GPR182O15218 404 aa8.07□□□□□ -1.12
LINC00458-201ENST00000423442 RNGTTO60942 597 aaKnown RBP8.07□□□□□ -1.12
LINC00458-201ENST00000423442 GRM2Q14416 872 aa8.07□□□□□ -1.12
LINC00458-201ENST00000423442 KIF4BQ2VIQ3 1234 aa8.07□□□□□ -1.12
LINC00458-201ENST00000423442 WAPLQ7Z5K2 1190 aa8.07□□□□□ -1.12
LINC00458-201ENST00000423442 ATG4DQ86TL0 474 aaPredicted RBP8.07□□□□□ -1.12
LINC00458-201ENST00000423442 NIF3L1Q9GZT8 377 aa8.07□□□□□ -1.12
LINC00458-201ENST00000423442 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
LINC00458-201ENST00000423442 FAM83GA6ND36 823 aa8.06□□□□□ -1.12
LINC00458-201ENST00000423442 IGHA2P01877 340 aa8.06□□□□□ -1.12
LINC00458-201ENST00000423442 GSTP1P09211 210 aaKnown RBP8.06□□□□□ -1.12
LINC00458-201ENST00000423442 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
LINC00458-201ENST00000423442 VAV3Q9UKW4 847 aa8.06□□□□□ -1.12
LINC00458-201ENST00000423442 PPLO60437 1756 aa8.06□□□□□ -1.12
LINC00458-201ENST00000423442 ABCA3Q99758 1704 aa8.06□□□□□ -1.12
LINC00458-201ENST00000423442 ADGRF5Q8IZF2 1346 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 KIF1AQ12756 1690 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 RGPD8O14715 1765 aaPredicted RBP8.05□□□□□ -1.12
LINC00458-201ENST00000423442 PRKCQQ04759 706 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 AOC3Q16853 763 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 LCE4AQ5TA78 99 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 TMEM132EQ6IEE7 984 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 LRRN4CLQ8ND94 238 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 FAM168AQ92567 244 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 CAMKK2Q96RR4 588 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 DUSP23Q9BVJ7 150 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 KRTAP4-2Q9BYR5 136 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 DNAJC25Q9H1X3 360 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 NRAPQ86VF7 1730 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 FMN2Q9NZ56 1722 aa8.05□□□□□ -1.12
LINC00458-201ENST00000423442 DHX57Q6P158 1386 aaKnown RBP8.05□□□□□ -1.12
LINC00458-201ENST00000423442 DISP2A7MBM2 1401 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 TNS3Q68CZ2 1445 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 NEFMP07197 916 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 OXCT1P55809 520 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 IFI16Q16666 785 aaKnown RBP8.04□□□□□ -1.12
LINC00458-201ENST00000423442 PDZD3Q86UT5 571 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 PI4K2BQ8TCG2 481 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 TMC1Q8TDI8 760 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 KCNB2Q92953 911 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 C14orf93Q9H972 538 aaKnown RBP8.04□□□□□ -1.12
LINC00458-201ENST00000423442 KRT82Q9NSB4 513 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 BTG4Q9NY30 223 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 POGKQ9P215 609 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 TRAK1Q9UPV9 953 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 PLEKHH1Q9ULM0 1364 aa8.04□□□□□ -1.12
LINC00458-201ENST00000423442 TRIM37O94972 964 aa8.03□□□□□ -1.12
LINC00458-201ENST00000423442 FCGRTP55899 365 aa8.03□□□□□ -1.12
LINC00458-201ENST00000423442 STK35Q8TDR2 534 aa8.03□□□□□ -1.12
LINC00458-201ENST00000423442 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
LINC00458-201ENST00000423442 PCOLCE2Q9UKZ9 415 aa8.03□□□□□ -1.12
LINC00458-201ENST00000423442 CEACAM5P06731 702 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 TRIM26Q12899 539 aaPredicted RBP8.02□□□□□ -1.13
LINC00458-201ENST00000423442 PI16Q6UXB8 463 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 DTHD1Q6ZMT9 781 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 ARHGAP27Q6ZUM4 889 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 TOP6BLQ8N6T0 577 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 ISL2Q96A47 359 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 HRASLS5Q96KN8 279 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 CITED4Q96RK1 184 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms