RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 C8orf76Q96K31 380 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 ZSCAN31Q96LW9 406 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-212ENST00000423061 GRIN2AQ12879 1464 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 CCT8L1PA6NM43 557 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 C1orf141Q5JVX7 400 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 HOOK2Q96ED9 719 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 CCDC125Q86Z20 511 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 ENC1O14682 589 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 ALS2CLQ60I27 953 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 DDX21Q9NR30 783 aaKnown RBP eCLIP3.78□□□□□ -1.8
SYNE1-212ENST00000423061 PCDHGA4Q9Y5G9 962 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 STAT6P42226 847 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 GALK1P51570 392 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 SREK1Q8WXA9 508 aaKnown RBP3.78□□□□□ -1.8
SYNE1-212ENST00000423061 DUOX2Q9NRD8 1548 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 TMEM232C9JQI7 657 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 AHCYL1O43865 530 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 NUGGCQ68CJ6 796 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 USP28Q96RU2 1077 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 SATB2Q9UPW6 733 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 EID1Q9Y6B2 187 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 PHLPP2Q6ZVD8 1323 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 CCDC151A5D8V7 595 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 SCTRP47872 440 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 DHX40Q8IX18 779 aaKnown RBP3.78□□□□□ -1.8
SYNE1-212ENST00000423061 KCNK9Q9NPC2 374 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 RBMX2Q9Y388 322 aaKnown RBP3.78□□□□□ -1.8
SYNE1-212ENST00000423061 BICRAQ9NZM4 1560 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 MTTPP55157 894 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 UHRF1BP1Q6BDS2 1440 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 OGFOD1Q8N543 542 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 KRI1Q8N9T8 703 aaKnown RBP3.78□□□□□ -1.8
SYNE1-212ENST00000423061 FSBPO95073 299 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 ZNF473Q8WTR7 871 aaKnown RBP3.78□□□□□ -1.8
SYNE1-212ENST00000423061 ARL8AQ96BM9 186 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 RFC5P40937 340 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 DHRS1Q96LJ7 313 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 GSTT1P30711 240 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 MDM1Q8TC05 714 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 TBC1D2BQ9UPU7 963 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 S100BP04271 92 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-212ENST00000423061 SERPINB3P29508 390 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 ANKRD1Q15327 319 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 PALD1Q9ULE6 856 aa3.78□□□□□ -1.8
SYNE1-212ENST00000423061 PRAG1Q86YV5 1406 aa3.78□□□□□ -1.81
SYNE1-212ENST00000423061 STK10O94804 968 aaKnown RBP3.78□□□□□ -1.81
SYNE1-212ENST00000423061 VAV2P52735 878 aa3.78□□□□□ -1.81
SYNE1-212ENST00000423061 NECTIN2Q92692 538 aa3.78□□□□□ -1.81
SYNE1-212ENST00000423061 DACT3Q96B18 629 aaPredicted RBP3.78□□□□□ -1.81
SYNE1-212ENST00000423061 EXOC1Q9NV70 894 aa3.78□□□□□ -1.81
SYNE1-212ENST00000423061 PTGISQ16647 500 aa3.78□□□□□ -1.81
SYNE1-212ENST00000423061 RPGRIP1LQ68CZ1 1315 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 OPTNQ96CV9 577 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 ELAC2Q9BQ52 826 aaKnown RBP3.77□□□□□ -1.81
SYNE1-212ENST00000423061 A1CFQ9NQ94 594 aaKnown RBP3.77□□□□□ -1.81
SYNE1-212ENST00000423061 PFKFB2O60825 505 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 ESYT1Q9BSJ8 1104 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 SAMD15Q9P1V8 674 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 MTMR6Q9Y217 621 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 CDHR2Q9BYE9 1310 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 CLASP1Q7Z460 1538 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 MAP3K7O43318 606 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 ADAMTS2O95450 1211 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 A1BGP04217 495 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 COBLO75128 1261 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 GFPT2O94808 682 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 ATICP31939 592 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 SPA17Q15506 151 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 GGT6Q6P531 493 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 APOEP02649 317 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 PRKAR2BP31323 418 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 BTKQ06187 659 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 PSMD6Q15008 389 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.77□□□□□ -1.81
SYNE1-212ENST00000423061 CDHR1Q96JP9 859 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 OSBPL5Q9H0X9 879 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-212ENST00000423061 P4HA2O15460 535 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 NOA1Q8NC60 698 aaKnown RBP3.77□□□□□ -1.81
SYNE1-212ENST00000423061 SPIRE2Q8WWL2 714 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 RPGRIP1Q96KN7 1286 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 PPP1R2P41236 205 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 MTHFSP49914 203 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 TUBB4BP68371 445 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 CKAP4Q07065 602 aaKnown RBP3.77□□□□□ -1.81
SYNE1-212ENST00000423061 PPP1R2P3Q6NXS1 205 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 STAG2Q8N3U4 1231 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 CHPF2Q9P2E5 772 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 ATXN10Q9UBB4 475 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 GMNCA6NCL1 334 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 FNTAP49354 379 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 CCT4P50991 539 aaKnown RBP3.77□□□□□ -1.81
SYNE1-212ENST00000423061 NDNQ99608 321 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 IL1RAPL2Q9NP60 686 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 UNCXA6NJT0 531 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 KRT38O76015 456 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 ITGA7Q13683 1181 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 PRELID1Q9Y255 219 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 TACC1O75410 805 aa3.77□□□□□ -1.81
SYNE1-212ENST00000423061 NUP88Q99567 741 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-212ENST00000423061 NEK2P51955 445 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms