RNA–Protein interactions for RNA: ENST00000422713.1

TTC38-204, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 5

Gene TTC38, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-204ENST00000422713 DEFB118Q96PH6 123 aa15.76■□□□□ 0.11
TTC38-204ENST00000422713 NUDT12Q9BQG2 462 aa15.76■□□□□ 0.11
TTC38-204ENST00000422713 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.76■□□□□ 0.11
TTC38-204ENST00000422713 RLFQ13129 1914 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 MINDY4BA8MYZ0 360 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 FARP2O94887 1054 aaPredicted RBP15.75■□□□□ 0.11
TTC38-204ENST00000422713 APPP05067 770 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 GNAT2P19087 354 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 ATP2B2Q01814 1243 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 SBK1Q52WX2 424 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 KIAA1755Q5JYT7 1200 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 LBX2Q6XYB7 198 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 PLEKHH3Q7Z736 793 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 SPICE1Q8N0Z3 855 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 STK11IPQ8N1F8 1099 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 VCPKMTQ9H867 229 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 PAK6Q9NQU5 681 aaPredicted RBP15.75■□□□□ 0.11
TTC38-204ENST00000422713 TMX2Q9Y320 296 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 PARP14Q460N5 1801 aa15.75■□□□□ 0.11
TTC38-204ENST00000422713 ZKSCAN1P17029 563 aaPredicted RBP15.74■□□□□ 0.11
TTC38-204ENST00000422713 RGS2P41220 211 aa15.74■□□□□ 0.11
TTC38-204ENST00000422713 TRIM32Q13049 653 aa15.74■□□□□ 0.11
TTC38-204ENST00000422713 SIAH1Q8IUQ4 282 aa15.74■□□□□ 0.11
TTC38-204ENST00000422713 SEC62Q99442 399 aaKnown RBP15.74■□□□□ 0.11
TTC38-204ENST00000422713 APBA2Q99767 749 aa15.74■□□□□ 0.11
TTC38-204ENST00000422713 BTBD7Q9P203 1132 aa15.74■□□□□ 0.11
TTC38-204ENST00000422713 ZNF236Q9UL36 1845 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 WDR46O15213 610 aaKnown RBP15.73■□□□□ 0.11
TTC38-204ENST00000422713 FLOT1O75955 427 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 SGPL1O95470 568 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 XRCC5P13010 732 aaKnown RBP15.73■□□□□ 0.11
TTC38-204ENST00000422713 EEF2P13639 858 aaKnown RBP15.73■□□□□ 0.11
TTC38-204ENST00000422713 RASA1P20936 1047 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 AAMPQ13685 434 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 ZMYM1Q5SVZ6 1142 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 UBE2Q1Q7Z7E8 422 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 KANSL2Q9H9L4 492 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 MKNK2Q9HBH9 465 aa15.73■□□□□ 0.11
TTC38-204ENST00000422713 PRKAR2AP13861 404 aaKnown RBP15.72■□□□□ 0.11
TTC38-204ENST00000422713 PDE1AP54750 535 aa15.72■□□□□ 0.11
TTC38-204ENST00000422713 COG2Q14746 738 aa15.72■□□□□ 0.11
TTC38-204ENST00000422713 MORN1Q5T089 497 aa15.72■□□□□ 0.11
TTC38-204ENST00000422713 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
TTC38-204ENST00000422713 USP6NLQ92738 828 aa15.72■□□□□ 0.11
TTC38-204ENST00000422713 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.72■□□□□ 0.11
TTC38-204ENST00000422713 NACAP1Q9BZK3 213 aa15.72■□□□□ 0.11
TTC38-204ENST00000422713 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
TTC38-204ENST00000422713 STAP2Q9UGK3 403 aa15.72■□□□□ 0.11
TTC38-204ENST00000422713 IVNS1ABPQ9Y6Y0 642 aa15.72■□□□□ 0.11
TTC38-204ENST00000422713 RPTORQ8N122 1335 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 RAD21O60216 631 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 PRDM1O75626 825 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 MAP2K5Q13163 448 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 CCL14Q16627 93 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 TRMT44Q8IYL2 757 aaKnown RBP15.71■□□□□ 0.11
TTC38-204ENST00000422713 IFNL3Q8IZI9 196 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 ATG4CQ96DT6 458 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 CRISPLD2Q9H0B8 497 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 NAPBQ9H115 298 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 GOPCQ9HD26 462 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 HMX1Q9NP08 348 aaPredicted RBP15.71■□□□□ 0.11
TTC38-204ENST00000422713 HOXC10Q9NYD6 342 aa15.71■□□□□ 0.11
TTC38-204ENST00000422713 SLC15A5A6NIM6 579 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 PATL2C9JE40 543 aaKnown RBP15.7■□□□□ 0.1
TTC38-204ENST00000422713 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
TTC38-204ENST00000422713 GRB14Q14449 540 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 MAP3K21Q5TCX8 1036 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 MB21D1Q8N884 522 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 EXOC6Q8TAG9 804 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 EVI5LQ96CN4 794 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 HTATIP2Q9BUP3 242 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 MOV10L1Q9BXT6 1211 aaKnown RBP15.7■□□□□ 0.1
TTC38-204ENST00000422713 SPATC1LQ9H0A9 340 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 PLIN4Q96Q06 1357 aa15.7■□□□□ 0.1
TTC38-204ENST00000422713 COL11A1P12107 1806 aaPredicted RBP15.7■□□□□ 0.1
TTC38-204ENST00000422713 MYH4Q9Y623 1939 aa15.69■□□□□ 0.1
TTC38-204ENST00000422713 PTPREP23469 700 aa15.69■□□□□ 0.1
TTC38-204ENST00000422713 DSG3P32926 999 aa15.69■□□□□ 0.1
TTC38-204ENST00000422713 PLS1Q14651 629 aa15.69■□□□□ 0.1
TTC38-204ENST00000422713 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
TTC38-204ENST00000422713 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
TTC38-204ENST00000422713 SMC5Q8IY18 1101 aa15.69■□□□□ 0.1
TTC38-204ENST00000422713 RWDD1Q9H446 243 aaPredicted RBP15.69■□□□□ 0.1
TTC38-204ENST00000422713 FBXO28Q9NVF7 368 aa15.69■□□□□ 0.1
TTC38-204ENST00000422713 RANBP2P49792 3224 aaKnown RBP15.68■□□□□ 0.1
TTC38-204ENST00000422713 ERCC3P19447 782 aa15.68■□□□□ 0.1
TTC38-204ENST00000422713 PPARAQ07869 468 aa15.68■□□□□ 0.1
TTC38-204ENST00000422713 SHCBP1Q8NEM2 672 aa15.68■□□□□ 0.1
TTC38-204ENST00000422713 DIS3LQ8TF46 1054 aaKnown RBP15.68■□□□□ 0.1
TTC38-204ENST00000422713 DPF3Q92784 378 aa15.68■□□□□ 0.1
TTC38-204ENST00000422713 FRMPD3Q5JV73 1810 aa15.68■□□□□ 0.1
TTC38-204ENST00000422713 IGKV6D-41A0A0C4DH26 115 aa15.67■□□□□ 0.1
TTC38-204ENST00000422713 H0YGN5 161 aa15.67■□□□□ 0.1
TTC38-204ENST00000422713 FOXP2O15409 715 aa15.67■□□□□ 0.1
TTC38-204ENST00000422713 SLC34A2O95436 690 aa15.67■□□□□ 0.1
TTC38-204ENST00000422713 NDUFB10O96000 172 aa15.67■□□□□ 0.1
TTC38-204ENST00000422713 SLC3A2P08195 630 aaKnown RBP15.67■□□□□ 0.1
TTC38-204ENST00000422713 CAPN2P17655 700 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms