RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 CCNL1Q9UK58 526 aaPredicted RBP29.4■■■□□ 2.3
ITGA9-203ENST00000422441 VEGFAP15692 232 aaPredicted RBP29.39■■■□□ 2.3
ITGA9-203ENST00000422441 PTGDRQ13258 359 aa29.39■■■□□ 2.3
ITGA9-203ENST00000422441 SAMSN1Q9NSI8 373 aaKnown RBP29.39■■■□□ 2.3
ITGA9-203ENST00000422441 MKRN1Q9UHC7 482 aaKnown RBP29.39■■■□□ 2.3
ITGA9-203ENST00000422441 TUBB4AP04350 444 aa29.38■■■□□ 2.29
ITGA9-203ENST00000422441 NLRP5P59047 1200 aa29.38■■■□□ 2.29
ITGA9-203ENST00000422441 SYT10Q6XYQ8 523 aa29.38■■■□□ 2.29
ITGA9-203ENST00000422441 CCP110O43303 1012 aa29.38■■■□□ 2.29
ITGA9-203ENST00000422441 TMEM139Q8IV31 216 aa29.38■■■□□ 2.29
ITGA9-203ENST00000422441 CT47A1Q5JQC4 288 aaPredicted RBP29.37■■■□□ 2.29
ITGA9-203ENST00000422441 VWA3AA6NCI4 1184 aa29.37■■■□□ 2.29
ITGA9-203ENST00000422441 DPYDQ12882 1025 aa29.37■■■□□ 2.29
ITGA9-203ENST00000422441 C12orf60Q5U649 245 aa29.37■■■□□ 2.29
ITGA9-203ENST00000422441 PIK3AP1Q6ZUJ8 805 aa29.37■■■□□ 2.29
ITGA9-203ENST00000422441 BCL11BQ9C0K0 894 aaPredicted RBP29.37■■■□□ 2.29
ITGA9-203ENST00000422441 ADAMTS3O15072 1205 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 CASP1P29466 404 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 TRAPPC10P48553 1259 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 SLC4A8Q2Y0W8 1093 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 ERO1AQ96HE7 468 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 L2HGDHQ9H9P8 463 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 TNRC6CQ9HCJ0 1690 aaKnown RBP29.36■■■□□ 2.29
ITGA9-203ENST00000422441 KIF5BP33176 963 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 TFAP4Q01664 338 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 SPECC1LQ69YQ0 1117 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 SLC51AQ86UW1 340 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 IL17RBQ9NRM6 502 aa29.36■■■□□ 2.29
ITGA9-203ENST00000422441 SLU7O95391 586 aaKnown RBP29.35■■■□□ 2.29
ITGA9-203ENST00000422441 CD44P16070 742 aaKnown RBP29.34■■■□□ 2.29
ITGA9-203ENST00000422441 CUL4BQ13620 913 aa29.34■■■□□ 2.29
ITGA9-203ENST00000422441 NR1I3Q14994 352 aa29.34■■■□□ 2.29
ITGA9-203ENST00000422441 FCHSD1Q86WN1 690 aa29.34■■■□□ 2.29
ITGA9-203ENST00000422441 DGKHQ86XP1 1220 aa29.34■■■□□ 2.29
ITGA9-203ENST00000422441 GSDMAQ96QA5 445 aa29.34■■■□□ 2.29
ITGA9-203ENST00000422441 KAT14Q9H8E8 782 aa29.34■■■□□ 2.29
ITGA9-203ENST00000422441 CGNQ9P2M7 1197 aaKnown RBP29.34■■■□□ 2.29
ITGA9-203ENST00000422441 LDHBP07195 334 aaKnown RBP29.34■■■□□ 2.29
ITGA9-203ENST00000422441 WDR66Q8TBY9 1149 aa29.34■■■□□ 2.29
ITGA9-203ENST00000422441 ANKIB1Q9P2G1 1089 aa29.34■■■□□ 2.29
ITGA9-203ENST00000422441 TOM1O60784 492 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 ETF1P62495 437 aaKnown RBP29.33■■■□□ 2.29
ITGA9-203ENST00000422441 REXO1L1PQ8IX06 675 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 SH3RF3Q8TEJ3 882 aaPredicted RBP29.33■■■□□ 2.29
ITGA9-203ENST00000422441 ANKS1AQ92625 1134 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 LEMD3Q9Y2U8 911 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 NPHP1O15259 732 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 ARHGAP6O43182 974 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 USP5P45974 858 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 CCDC93Q567U6 631 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 SPATA1Q5VX52 437 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 HOMER1Q86YM7 354 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 TC2NQ8N9U0 490 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 DYNLL2Q96FJ2 89 aa29.33■■■□□ 2.29
ITGA9-203ENST00000422441 SBF2Q86WG5 1849 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 GRAPQ13588 217 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 E2F4Q16254 413 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 IL17AQ16552 155 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 FAM182BQ5T319 152 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 GRAPLQ8TC17 118 aaPredicted RBP29.32■■■□□ 2.28
ITGA9-203ENST00000422441 A0A1B0GTH6 734 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 IGSF3O75054 1194 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 NT5C2P49902 561 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 TRIM65Q6PJ69 517 aa29.32■■■□□ 2.28
ITGA9-203ENST00000422441 NHSQ6T4R5 1651 aa29.31■■■□□ 2.28
ITGA9-203ENST00000422441 MCM7P33993 719 aa29.31■■■□□ 2.28
ITGA9-203ENST00000422441 APTXQ7Z2E3 356 aaKnown RBP29.31■■■□□ 2.28
ITGA9-203ENST00000422441 PNMA1Q8ND90 353 aa29.31■■■□□ 2.28
ITGA9-203ENST00000422441 BAG1Q99933 345 aaPredicted RBP29.31■■■□□ 2.28
ITGA9-203ENST00000422441 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.31■■■□□ 2.28
ITGA9-203ENST00000422441 V9GYY5 206 aaPredicted RBP29.31■■■□□ 2.28
ITGA9-203ENST00000422441 PPP1R3GB7ZBB8 358 aa29.31■■■□□ 2.28
ITGA9-203ENST00000422441 CALML3P27482 149 aa29.31■■■□□ 2.28
ITGA9-203ENST00000422441 GRIK5Q16478 980 aa29.31■■■□□ 2.28
ITGA9-203ENST00000422441 KLHL10Q6JEL2 608 aa29.31■■■□□ 2.28
ITGA9-203ENST00000422441 CBX1P83916 185 aa29.3■■■□□ 2.28
ITGA9-203ENST00000422441 NFIXQ14938 502 aa29.3■■■□□ 2.28
ITGA9-203ENST00000422441 STAG2Q8N3U4 1231 aa29.3■■■□□ 2.28
ITGA9-203ENST00000422441 IQUBQ8NA54 791 aa29.3■■■□□ 2.28
ITGA9-203ENST00000422441 SH3GLB2Q9NR46 395 aa29.3■■■□□ 2.28
ITGA9-203ENST00000422441 XDHP47989 1333 aa29.3■■■□□ 2.28
ITGA9-203ENST00000422441 ROBO3Q96MS0 1386 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 PHLPP2Q6ZVD8 1323 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 SYNRGQ9UMZ2 1314 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 RFC4P35249 363 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 ADKP55263 362 aaKnown RBP29.29■■■□□ 2.28
ITGA9-203ENST00000422441 STX17P56962 302 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 DIXDC1Q155Q3 683 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 BLIDQ8IZY5 108 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 FNBP4Q8N3X1 1017 aaPredicted RBP29.29■■■□□ 2.28
ITGA9-203ENST00000422441 ZSCAN12O43309 604 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 STX10O60499 249 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 SMYD4Q8IYR2 804 aaPredicted RBP29.29■■■□□ 2.28
ITGA9-203ENST00000422441 STAMQ92783 540 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 TAF1LQ8IZX4 1826 aa29.29■■■□□ 2.28
ITGA9-203ENST00000422441 PPP4CP60510 307 aa29.28■■■□□ 2.28
ITGA9-203ENST00000422441 GSTO1P78417 241 aa29.28■■■□□ 2.28
ITGA9-203ENST00000422441 GRM4Q14833 912 aa29.28■■■□□ 2.28
ITGA9-203ENST00000422441 TRAPPC3LQ5T215 181 aa29.28■■■□□ 2.28
ITGA9-203ENST00000422441 PDXDC2PQ6P474 469 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms