RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 STK11IPQ8N1F8 1099 aa26.16■■□□□ 1.78
TRAF4-204ENST00000422344 MKNK2Q9HBH9 465 aa26.16■■□□□ 1.78
TRAF4-204ENST00000422344 EPB41L4AQ9HCS5 686 aaPredicted RBP26.16■■□□□ 1.78
TRAF4-204ENST00000422344 DOCK3Q8IZD9 2030 aa26.15■■□□□ 1.78
TRAF4-204ENST00000422344 NAPBQ9H115 298 aa26.15■■□□□ 1.78
TRAF4-204ENST00000422344 ZNF287Q9HBT7 754 aa26.15■■□□□ 1.78
TRAF4-204ENST00000422344 MORF4L1Q9UBU8 362 aa26.15■■□□□ 1.78
TRAF4-204ENST00000422344 INHAP05111 366 aa26.14■■□□□ 1.78
TRAF4-204ENST00000422344 GPRC5AQ8NFJ5 357 aa26.14■■□□□ 1.78
TRAF4-204ENST00000422344 RILPL2Q969X0 211 aa26.14■■□□□ 1.78
TRAF4-204ENST00000422344 NR2E3Q9Y5X4 410 aa26.14■■□□□ 1.78
TRAF4-204ENST00000422344 ROBO3Q96MS0 1386 aa26.14■■□□□ 1.78
TRAF4-204ENST00000422344 A0A1W2PRG0 241 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 ATP2B2Q01814 1243 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 IRF5Q13568 498 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 CATSPERGQ6ZRH7 1159 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 CLEC10AQ8IUN9 316 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 PLEKHM2Q8IWE5 1019 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 CCAR1Q8IX12 1150 aaKnown RBP26.13■■□□□ 1.77
TRAF4-204ENST00000422344 PXYLP1Q8TE99 480 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 PAGR1Q9BTK6 254 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 RPAP3Q9H6T3 665 aaPredicted RBP26.13■■□□□ 1.77
TRAF4-204ENST00000422344 KANSL2Q9H9L4 492 aa26.13■■□□□ 1.77
TRAF4-204ENST00000422344 TFRCP02786 760 aaKnown RBP26.12■■□□□ 1.77
TRAF4-204ENST00000422344 SLC3A2P08195 630 aaKnown RBP26.12■■□□□ 1.77
TRAF4-204ENST00000422344 TICAM2Q86XR7 235 aa26.12■■□□□ 1.77
TRAF4-204ENST00000422344 DEFB118Q96PH6 123 aa26.12■■□□□ 1.77
TRAF4-204ENST00000422344 HELLSQ9NRZ9 838 aa26.12■■□□□ 1.77
TRAF4-204ENST00000422344 CCDC129Q6ZRS4 1044 aa26.11■■□□□ 1.77
TRAF4-204ENST00000422344 LPAR1Q92633 364 aa26.11■■□□□ 1.77
TRAF4-204ENST00000422344 TANGO6Q9C0B7 1094 aa26.11■■□□□ 1.77
TRAF4-204ENST00000422344 OSBPL3Q9H4L5 887 aa26.11■■□□□ 1.77
TRAF4-204ENST00000422344 RBPJLQ9UBG7 517 aa26.11■■□□□ 1.77
TRAF4-204ENST00000422344 TMX2Q9Y320 296 aa26.11■■□□□ 1.77
TRAF4-204ENST00000422344 TXNRD2Q9NNW7 524 aa26.1■■□□□ 1.77
TRAF4-204ENST00000422344 EEF2P13639 858 aaKnown RBP26.09■■□□□ 1.77
TRAF4-204ENST00000422344 RASA1P20936 1047 aa26.09■■□□□ 1.77
TRAF4-204ENST00000422344 ERVK-9P63128 1117 aa26.09■■□□□ 1.77
TRAF4-204ENST00000422344 ERVK-24P63145 666 aa26.09■■□□□ 1.77
TRAF4-204ENST00000422344 ZNF444Q8N0Y2 327 aaPredicted RBP26.09■■□□□ 1.77
TRAF4-204ENST00000422344 PRO3102Q9H379 93 aa26.09■■□□□ 1.77
TRAF4-204ENST00000422344 VCPKMTQ9H867 229 aa26.09■■□□□ 1.77
TRAF4-204ENST00000422344 CWC22Q9HCG8 908 aaKnown RBP26.09■■□□□ 1.77
TRAF4-204ENST00000422344 RABGAP1Q9Y3P9 1069 aa26.09■■□□□ 1.77
TRAF4-204ENST00000422344 PEX10O60683 326 aa26.08■■□□□ 1.77
TRAF4-204ENST00000422344 PDE4BQ07343 736 aa26.08■■□□□ 1.77
TRAF4-204ENST00000422344 MCMDC2Q4G0Z9 681 aa26.08■■□□□ 1.77
TRAF4-204ENST00000422344 SIAH1Q8IUQ4 282 aa26.08■■□□□ 1.77
TRAF4-204ENST00000422344 RAD21O60216 631 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 EVI5O60447 810 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 PRDM1O75626 825 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 MAPK4P31152 587 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 CCNA1P78396 465 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 PPARAQ07869 468 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 SPICE1Q8N0Z3 855 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 FAM227BQ96M60 508 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 GOPCQ9HD26 462 aa26.07■■□□□ 1.76
TRAF4-204ENST00000422344 PAK6Q9NQU5 681 aaPredicted RBP26.07■■□□□ 1.76
TRAF4-204ENST00000422344 A0A0D9SFI3 127 aa26.06■■□□□ 1.76
TRAF4-204ENST00000422344 NMIQ13287 307 aaPredicted RBP26.06■■□□□ 1.76
TRAF4-204ENST00000422344 COG2Q14746 738 aa26.06■■□□□ 1.76
TRAF4-204ENST00000422344 HOXC10Q9NYD6 342 aa26.06■■□□□ 1.76
TRAF4-204ENST00000422344 SPDYE16A6NNV3 312 aaPredicted RBP26.05■■□□□ 1.76
TRAF4-204ENST00000422344 CAPN2P17655 700 aa26.05■■□□□ 1.76
TRAF4-204ENST00000422344 Q3C1V9 767 aa26.05■■□□□ 1.76
TRAF4-204ENST00000422344 LBX2Q6XYB7 198 aa26.05■■□□□ 1.76
TRAF4-204ENST00000422344 WDR46O15213 610 aaKnown RBP26.04■■□□□ 1.76
TRAF4-204ENST00000422344 KIAA1755Q5JYT7 1200 aa26.04■■□□□ 1.76
TRAF4-204ENST00000422344 VPS53Q5VIR6 699 aa26.04■■□□□ 1.76
TRAF4-204ENST00000422344 PAWRQ96IZ0 340 aaKnown RBP26.04■■□□□ 1.76
TRAF4-204ENST00000422344 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.04■■□□□ 1.76
TRAF4-204ENST00000422344 CRISPLD2Q9H0B8 497 aa26.04■■□□□ 1.76
TRAF4-204ENST00000422344 FLOT1O75955 427 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 TSPY3P0CV98 308 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 TSPY8P0CW00 308 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 SDSP20132 328 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 MFAP1P55081 439 aaKnown RBP26.03■■□□□ 1.76
TRAF4-204ENST00000422344 WDR78Q5VTH9 848 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 SOCS4Q8WXH5 440 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 NUDT12Q9BQG2 462 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.03■■□□□ 1.769e-7■■□□□ 14.2
TRAF4-204ENST00000422344 PORCNQ9H237 461 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 DIAPH3Q9NSV4 1193 aa26.03■■□□□ 1.76
TRAF4-204ENST00000422344 FOXP2O15409 715 aa26.02■■□□□ 1.76
TRAF4-204ENST00000422344 CNMDO75829 334 aa26.02■■□□□ 1.76
TRAF4-204ENST00000422344 POTEEQ6S8J3 1075 aa26.02■■□□□ 1.76
TRAF4-204ENST00000422344 SAMD1Q6SPF0 538 aaPredicted RBP26.02■■□□□ 1.76
TRAF4-204ENST00000422344 PLEKHH3Q7Z736 793 aa26.02■■□□□ 1.76
TRAF4-204ENST00000422344 NYAP2Q9P242 653 aa26.02■■□□□ 1.76
TRAF4-204ENST00000422344 CCDC171Q6TFL3 1326 aa26.02■■□□□ 1.76
TRAF4-204ENST00000422344 GREB1LQ9C091 1923 aaPredicted RBP26.02■■□□□ 1.76
TRAF4-204ENST00000422344 HIP1O00291 1037 aa26.01■■□□□ 1.75
TRAF4-204ENST00000422344 GPR142Q7Z601 462 aa26.01■■□□□ 1.75
TRAF4-204ENST00000422344 DIS3LQ8TF46 1054 aaKnown RBP26.01■■□□□ 1.75
TRAF4-204ENST00000422344 BTBD7Q9P203 1132 aa26.01■■□□□ 1.75
TRAF4-204ENST00000422344 GJD2Q9UKL4 321 aa26.01■■□□□ 1.75
TRAF4-204ENST00000422344 ALPK3Q96L96 1907 aa26■■□□□ 1.75
TRAF4-204ENST00000422344 CYP2B6P20813 491 aa26■■□□□ 1.75
TRAF4-204ENST00000422344 DSG3P32926 999 aa26■■□□□ 1.75
TRAF4-204ENST00000422344 CTDSPL2Q05D32 466 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms