RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 TGFBRAP1Q8WUH2 860 aa8.16□□□□□ -1.1
PMS1-208ENST00000421722 SPATC1LQ9H0A9 340 aa8.16□□□□□ -1.1
PMS1-208ENST00000421722 MTIF3Q9H2K0 278 aaKnown RBP8.16□□□□□ -1.1
PMS1-208ENST00000421722 XPNPEP3Q9NQH7 507 aa8.16□□□□□ -1.1
PMS1-208ENST00000421722 LRP2BPQ9P2M1 347 aa8.16□□□□□ -1.1
PMS1-208ENST00000421722 TBX21Q9UL17 535 aa8.16□□□□□ -1.1
PMS1-208ENST00000421722 A0A1W2PQ45 241 aaPredicted RBP8.15□□□□□ -1.1
PMS1-208ENST00000421722 A0A1W2PQY0 241 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 MOXD2PA6NHM9 499 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 SLC25A27O95847 323 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 COPB2P35606 906 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 FAAP100Q0VG06 881 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 MAPKAPK5Q8IW41 473 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 MSL3Q8N5Y2 521 aaKnown RBP8.15□□□□□ -1.1
PMS1-208ENST00000421722 HERVK_113Q902F9 699 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 FERMT2Q96AC1 680 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 MAML3Q96JK9 1138 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 PBX4Q9BYU1 374 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 RPAP3Q9H6T3 665 aaPredicted RBP8.15□□□□□ -1.1
PMS1-208ENST00000421722 CABP5Q9NP86 173 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 NDUFB9Q9Y6M9 179 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 POU3F3P20264 500 aaPredicted RBP8.15□□□□□ -1.1
PMS1-208ENST00000421722 TFCP2Q12800 502 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 MTX1Q13505 466 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 FAM47AQ5JRC9 791 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 GORABQ5T7V8 394 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 TMEM199Q8N511 208 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 NUP133Q8WUM0 1156 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.11e-19■□□□□ 9.5
PMS1-208ENST00000421722 LRFN3Q9BTN0 628 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 PRDM12Q9H4Q4 367 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 PA2G4Q9UQ80 394 aaKnown RBP8.15□□□□□ -1.1
PMS1-208ENST00000421722 ELP1O95163 1332 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 ZNF521Q96K83 1311 aa8.15□□□□□ -1.1
PMS1-208ENST00000421722 BRCA2P51587 3418 aa8.15□□□□□ -1.11
PMS1-208ENST00000421722 ERCC3P19447 782 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 ADGRE1Q14246 886 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 ABCB5Q2M3G0 1257 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 CCDC184Q52MB2 194 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 TMEM31Q5JXX7 168 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 CCDC129Q6ZRS4 1044 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 TTC6Q86TZ1 520 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 KLHDC9Q8NEP7 349 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 ZNF512BQ96KM6 892 aaPredicted RBP8.14□□□□□ -1.11
PMS1-208ENST00000421722 SEZ6LQ9BYH1 1024 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 GPR108Q9NPR9 543 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 AATFQ9NY61 560 aaKnown RBP eCLIP8.14□□□□□ -1.11
PMS1-208ENST00000421722 COL6A3P12111 3177 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 PLXNA1Q9UIW2 1896 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 ERC2O15083 957 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 TLR3O15455 904 aaKnown RBP8.14□□□□□ -1.11
PMS1-208ENST00000421722 PQBP1O60828 265 aaKnown RBP8.14□□□□□ -1.11
PMS1-208ENST00000421722 GPR37L1O60883 481 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 FCER1AP12319 257 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 AKR1A1P14550 325 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 CST5P28325 142 aaPredicted RBP8.14□□□□□ -1.11
PMS1-208ENST00000421722 DSG3P32926 999 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 CDK7P50613 346 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 SHROOM1Q2M3G4 852 aaPredicted RBP8.14□□□□□ -1.11
PMS1-208ENST00000421722 CERKLQ49MI3 558 aaPredicted RBP8.14□□□□□ -1.11
PMS1-208ENST00000421722 ANO1Q5XXA6 986 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 TBC1D9Q6ZT07 1266 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 PPM1EQ8WY54 764 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 SSH1Q8WYL5 1049 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 NEUROD6Q96NK8 337 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 IL23AQ9NPF7 189 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 PALD1Q9ULE6 856 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 COG5Q9UP83 839 aa8.14□□□□□ -1.11
PMS1-208ENST00000421722 ADAMTS4O75173 837 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 MCAMP43121 646 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 ACLYP53396 1101 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 PRAMEF19Q5SWL8 479 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 ACER1Q8TDN7 264 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 API5Q9BZZ5 524 aaKnown RBP8.13□□□□□ -1.11
PMS1-208ENST00000421722 STARD7Q9NQZ5 370 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 SERPINB13Q9UIV8 391 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 RANBP2P49792 3224 aaKnown RBP8.13□□□□□ -1.11
PMS1-208ENST00000421722 MYH1P12882 1939 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 ZNF865P0CJ78 1059 aaPredicted RBP8.13□□□□□ -1.11
PMS1-208ENST00000421722 PBX2P40425 430 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 ZNF792Q3KQV3 632 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 C16orf59Q7L2K0 433 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 TINF2Q9BSI4 451 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 NKX2-4Q9H2Z4 354 aa8.13□□□□□ -1.11
PMS1-208ENST00000421722 SAP30BPQ9UHR5 308 aaKnown RBP8.13□□□□□ -1.11
PMS1-208ENST00000421722 A0A0U1RQG5 324 aaPredicted RBP8.12□□□□□ -1.11
PMS1-208ENST00000421722 MYCNP04198 464 aaPredicted RBP8.12□□□□□ -1.11
PMS1-208ENST00000421722 GNAI3P08754 354 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 IGFBP4P22692 258 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 NKX3-2P78367 333 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 ZYXQ15942 572 aaKnown RBP8.12□□□□□ -1.11
PMS1-208ENST00000421722 CCSAPQ6IQ19 270 aaPredicted RBP8.12□□□□□ -1.11
PMS1-208ENST00000421722 RIOX2Q8IUF8 465 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 PCSK9Q8NBP7 692 aaKnown RBP8.12□□□□□ -1.11
PMS1-208ENST00000421722 MMP19Q99542 508 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 UPF3AQ9H1J1 476 aaKnown RBP8.12□□□□□ -1.11
PMS1-208ENST00000421722 FAM184BQ9ULE4 1060 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 PCDHA11Q9Y5I1 949 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 ARVCFO00192 962 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 GUCY1A2P33402 732 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms