RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GPR75-ASB3A0A0A6YYF3 556 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 FAM196BA6NMK8 535 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 MCM7P33993 719 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 PPP4CP60510 307 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 GSTO1P78417 241 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 KIAA2012Q0VF49 1180 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 DNTTIP2Q5QJE6 756 aaKnown RBP10.1□□□□□ -0.79
SNCA-206ENST00000420646 DPP8Q6V1X1 898 aaPredicted RBP10.1□□□□□ -0.79
SNCA-206ENST00000420646 JMYQ8N9B5 988 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 CRAMP1Q96RY5 1269 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 EYA3Q99504 573 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 MTA3Q9BTC8 594 aa10.1□□□□□ -0.79
SNCA-206ENST00000420646 OFD1O75665 1012 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 SCG2P13521 617 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 PTPREP23469 700 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 NOLC1Q14978 699 aaKnown RBP eCLIP10.09□□□□□ -0.79
SNCA-206ENST00000420646 ZFPM1Q8IX07 1006 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 UBA5Q9GZZ9 404 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 PODXL2Q9NZ53 605 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 MAD2L2Q9UI95 211 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 FAM205AQ6ZU69 1335 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 VWA3AA6NCI4 1184 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 CUTAO60888 179 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 COBLO75128 1261 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 DDAH1O94760 285 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 LDHCP07864 332 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 AFMP43652 599 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 KRBA2Q6ZNG9 492 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 KIAA0825Q8IV33 1275 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 SP8Q8IXZ3 490 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 CACTINQ8WUQ7 758 aaKnown RBP10.09□□□□□ -0.79
SNCA-206ENST00000420646 DHX58Q96C10 678 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 CEP95Q96GE4 821 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 RBM28Q9NW13 759 aaKnown RBP10.09□□□□□ -0.79
SNCA-206ENST00000420646 KLRG2A4D1S0 409 aaPredicted RBP10.09□□□□□ -0.79
SNCA-206ENST00000420646 TRIM75PA6NK02 468 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 G3V3G9 751 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 TCP10Q12799 353 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 NFIAQ12857 509 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 PTGDRQ13258 359 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 R3HDM1Q15032 1099 aaKnown RBP10.09□□□□□ -0.79
SNCA-206ENST00000420646 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 HEATR3Q7Z4Q2 680 aa10.09□□□□□ -0.79
SNCA-206ENST00000420646 FRMPD2Q68DX3 1309 aaPredicted RBP10.08□□□□□ -0.8
SNCA-206ENST00000420646 CALM1P0DP23 149 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 CALM2P0DP24 149 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 CALM3P0DP25 149 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 PCP11498 1178 aaKnown RBP10.08□□□□□ -0.8
SNCA-206ENST00000420646 XBP1P17861 261 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 C15orf52Q6ZUT6 534 aaKnown RBP10.08□□□□□ -0.8
SNCA-206ENST00000420646 AMOTL1Q8IY63 956 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 RCAN1P53805 252 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 NCAPHQ15003 741 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 IL17AQ16552 155 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 PFKFB3Q16875 520 aaPredicted RBP10.08□□□□□ -0.8
SNCA-206ENST00000420646 LRRC47Q8N1G4 583 aaKnown RBP10.08□□□□□ -0.8
SNCA-206ENST00000420646 TNFRSF25Q93038 417 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 CCDC88AQ3V6T2 1871 aa10.08□□□□□ -0.8
SNCA-206ENST00000420646 RAD21O60216 631 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 SMC2O95347 1197 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 NLRP12P59046 1061 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 TRMT44Q8IYL2 757 aaKnown RBP10.07□□□□□ -0.8
SNCA-206ENST00000420646 TSC1Q92574 1164 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
SNCA-206ENST00000420646 IFNKQ9P0W0 207 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 SRPRBQ9Y5M8 271 aaKnown RBP10.07□□□□□ -0.8
SNCA-206ENST00000420646 USP17L5A8MUK1 530 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 KLRF2D3W0D1 207 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 MDM2Q00987 491 aaPredicted RBP10.07□□□□□ -0.8
SNCA-206ENST00000420646 ATP2B2Q01814 1243 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 EZH2Q15910 746 aaKnown RBP10.07□□□□□ -0.8
SNCA-206ENST00000420646 WWC2Q6AWC2 1192 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 DGKHQ86XP1 1220 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 SMYD4Q8IYR2 804 aaPredicted RBP10.07□□□□□ -0.8
SNCA-206ENST00000420646 DPF2Q92785 391 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 PLIN2Q99541 437 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
SNCA-206ENST00000420646 HSD3B7Q9H2F3 369 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 USP40Q9NVE5 1235 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 KIAA1551Q9HCM1 1747 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 PPP2R5BQ15173 497 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 TTC38Q5R3I4 469 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 C2CD5Q86YS7 1000 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 KIAA1524Q8TCG1 905 aa10.07□□□□□ -0.8
SNCA-206ENST00000420646 NAT10Q9H0A0 1025 aaKnown RBP10.07□□□□□ -0.8
SNCA-206ENST00000420646 MYH6P13533 1939 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 PP2D1A8MPX8 630 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 PLSCR1O15162 318 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 AKR1B1P15121 316 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 NPR1P16066 1061 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 KIF5BP33176 963 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 RBM5P52756 815 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNCA-206ENST00000420646 GOLGA8FQ08AF8 430 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 GOLGA8DPQ0D2H9 430 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 C16orf86Q6ZW13 317 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 FMR1Q06787 632 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNCA-206ENST00000420646 POSTNQ15063 836 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms