RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 USPL1Q5W0Q7 1092 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 NCAPG2Q86XI2 1143 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 TICAM2Q86XR7 235 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 HSCBQ8IWL3 235 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 GALNT12Q8IXK2 581 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 CCDC74AQ96AQ1 378 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 SPACA7Q96KW9 195 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 MYD88Q99836 296 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 KANSL3Q9P2N6 904 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 KLF15Q9UIH9 416 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 GGA1Q9UJY5 639 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 USP16Q9Y5T5 823 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 WNK3Q9BYP7 1800 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 SALL3Q9BXA9 1300 aa8.77□□□□□ -1.01
EPHA4-205ENST00000419964 PRAMEF22A3QJZ6 481 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 HIP1O00291 1037 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 GLRX3O76003 335 aaKnown RBP8.76□□□□□ -1.01
EPHA4-205ENST00000419964 GSPT1P15170 499 aaKnown RBP8.76□□□□□ -1.01
EPHA4-205ENST00000419964 SDSP20132 328 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 HSP90AB3PQ58FF7 597 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 KIF6Q6ZMV9 814 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 SLCO4C1Q6ZQN7 724 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 LRP10Q7Z4F1 713 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 CNTROBQ8N137 903 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 CCDC191Q8NCU4 936 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 SNX21Q969T3 373 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 NSUN5Q96P11 429 aaKnown RBP8.76□□□□□ -1.01
EPHA4-205ENST00000419964 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 WWC3Q9ULE0 1092 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 GLI3P10071 1580 aa8.76□□□□□ -1.01
EPHA4-205ENST00000419964 USP42Q9H9J4 1324 aaKnown RBP8.76□□□□□ -1.01
EPHA4-205ENST00000419964 BCL9O00512 1426 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 LOC102724428A0A0B4J2F2 783 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 SMARCA5O60264 1052 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-205ENST00000419964 KIF4AO95239 1232 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 POLR3DP05423 398 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-205ENST00000419964 IGKV5-2P06315 115 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 IFIT2P09913 472 aaKnown RBP8.75□□□□□ -1.01
EPHA4-205ENST00000419964 ALAS2P22557 587 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 GMPRP36959 345 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 ADH7P40394 386 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 SIK1P57059 783 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 RABEP1Q15276 862 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 DDB1Q16531 1140 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 CWF19L2Q2TBE0 894 aaKnown RBP8.75□□□□□ -1.01
EPHA4-205ENST00000419964 TREML4Q6UXN2 200 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 RBSNQ9H1K0 784 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 ATG3Q9NT62 314 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 CWC25Q9NXE8 425 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-205ENST00000419964 ARFGEF2Q9Y6D5 1785 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 SPATA31A1Q5TZJ5 1347 aa8.75□□□□□ -1.01
EPHA4-205ENST00000419964 JCADQ9P266 1359 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 ELOA3CA0A087WX78 387 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 A0A087WZG4 1122 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 ELOA3DA6NLF2 546 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 ZBTB42B2RXF5 422 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 GHRHP01286 108 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 HSP90B1P14625 803 aaKnown RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 MLLT1Q03111 559 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 TRIM28Q13263 835 aaKnown RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 ELOA3BQ3SY89 546 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 RABL6Q3YEC7 729 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 FCHSD1Q86WN1 690 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 C16orf71Q8IYS4 520 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 ELOA3Q8NG57 546 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 RUFY2Q8WXA3 655 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 SMARCC1Q92922 1105 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 FRMD6Q96NE9 622 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 BICC1Q9H694 974 aaKnown RBP8.74□□□□□ -1.01
EPHA4-205ENST00000419964 COPRSQ9NQ92 184 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 ECHDC1Q9NTX5 307 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 SLC6A14Q9UN76 642 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 SPATA31A6Q5VVP1 1343 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 SLIT2O94813 1529 aa8.74□□□□□ -1.01
EPHA4-205ENST00000419964 SLURP2P0DP57 97 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
EPHA4-205ENST00000419964 ANAPC15P60006 121 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 TAGLNQ01995 201 aaKnown RBP8.73□□□□□ -1.01
EPHA4-205ENST00000419964 COL13A1Q5TAT6 717 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-205ENST00000419964 FAM35AQ86V20 835 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 EPS8L3Q8TE67 593 aaKnown RBP8.73□□□□□ -1.01
EPHA4-205ENST00000419964 PIGBQ92521 554 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 ACDQ96AP0 544 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 SUCLG2Q96I99 432 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 SETDB2Q96T68 719 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 NPHS2Q9NP85 383 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 TOGARAM1Q9Y4F4 1720 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 SPATA31A5Q5VU36 1347 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 SPATA31A7Q8IWB4 1347 aa8.73□□□□□ -1.01
EPHA4-205ENST00000419964 ERVV-1B6SEH8 477 aa8.72□□□□□ -1.01
EPHA4-205ENST00000419964 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
EPHA4-205ENST00000419964 EPXP11678 715 aa8.72□□□□□ -1.01
EPHA4-205ENST00000419964 MCM2P49736 904 aa8.72□□□□□ -1.01
EPHA4-205ENST00000419964 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.72□□□□□ -1.01
EPHA4-205ENST00000419964 HFE2Q6ZVN8 426 aa8.72□□□□□ -1.01
EPHA4-205ENST00000419964 CEP120Q8N960 986 aa8.72□□□□□ -1.01
EPHA4-205ENST00000419964 RILPL2Q969X0 211 aa8.72□□□□□ -1.01
EPHA4-205ENST00000419964 MDFIQ99750 246 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms