RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 CWC22Q9HCG8 908 aaKnown RBP5.78□□□□□ -1.48
SDCBPP3-201ENST00000419629 PARD6AQ9NPB6 346 aa5.78□□□□□ -1.48
SDCBPP3-201ENST00000419629 EBF1Q9UH73 591 aa5.78□□□□□ -1.48
SDCBPP3-201ENST00000419629 KCNH3Q9ULD8 1083 aa5.78□□□□□ -1.48
SDCBPP3-201ENST00000419629 AK5Q9Y6K8 562 aa5.78□□□□□ -1.48
SDCBPP3-201ENST00000419629 SEMA7AO75326 666 aa5.77□□□□□ -1.49
SDCBPP3-201ENST00000419629 ERCC3P19447 782 aa5.77□□□□□ -1.49
SDCBPP3-201ENST00000419629 ZNF605Q86T29 641 aa5.77□□□□□ -1.49
SDCBPP3-201ENST00000419629 DHX38Q92620 1227 aaKnown RBP5.77□□□□□ -1.49
SDCBPP3-201ENST00000419629 INTS4Q96HW7 963 aaKnown RBP5.77□□□□□ -1.49
SDCBPP3-201ENST00000419629 GCM1Q9NP62 436 aa5.77□□□□□ -1.49
SDCBPP3-201ENST00000419629 RNF19AQ9NV58 838 aa5.77□□□□□ -1.49
SDCBPP3-201ENST00000419629 CORINQ9Y5Q5 1042 aa5.77□□□□□ -1.49
SDCBPP3-201ENST00000419629 PRPF40AO75400 957 aaKnown RBP5.76□□□□□ -1.49
SDCBPP3-201ENST00000419629 LTKP29376 864 aa5.76□□□□□ -1.49
SDCBPP3-201ENST00000419629 TEKQ02763 1124 aa5.76□□□□□ -1.49
SDCBPP3-201ENST00000419629 SNX17Q15036 470 aa5.76□□□□□ -1.49
SDCBPP3-201ENST00000419629 RNF141Q8WVD5 230 aa5.76□□□□□ -1.49
SDCBPP3-201ENST00000419629 JARID2Q92833 1246 aaPredicted RBP5.76□□□□□ -1.49
SDCBPP3-201ENST00000419629 SHISA4Q96DD7 197 aa5.76□□□□□ -1.49
SDCBPP3-201ENST00000419629 ZNF281Q9Y2X9 895 aa5.76□□□□□ -1.49
SDCBPP3-201ENST00000419629 TEX51A0A1B0GUA7 166 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 BMP7P18075 431 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 TMEM201Q5SNT2 666 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 MEI1Q5TIA1 1274 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 SPPL2CQ8IUH8 684 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 LINC01599Q8WXQ3 324 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 RELTQ969Z4 430 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 SGPP1Q9BX95 441 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 TLR6Q9Y2C9 796 aa5.75□□□□□ -1.49
SDCBPP3-201ENST00000419629 RBM47A0AV96 593 aaKnown RBP5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 NOTOA8MTQ0 251 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 PSPNO60542 156 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 PLCG1P19174 1290 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 YARSP54577 528 aaKnown RBP5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 CHRNEQ04844 493 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 TMCO4Q5TGY1 634 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 CCDC84Q86UT8 332 aaPredicted RBP5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 SLFN12Q8IYM2 578 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 PHC3Q8NDX5 983 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 FAM13CQ8NE31 585 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 KCNC2Q96PR1 638 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 DUSP9Q99956 384 aaKnown RBP5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 G6PC3Q9BUM1 346 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 ZCCHC4Q9H5U6 513 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 GPR160Q9UJ42 338 aa5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 CNOT6Q9ULM6 557 aaKnown RBP5.74□□□□□ -1.49
SDCBPP3-201ENST00000419629 A0A0G2JLL6 359 aaPredicted RBP5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 SHISA3A0PJX4 238 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 FAM221AA4D161 298 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 ANKRD33BA6NCL7 494 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 RLBP1P12271 317 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 GALK1P51570 392 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 TMEM132EQ6IEE7 984 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 BCL11AQ9H165 835 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 KCTD3Q9Y597 815 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 ADAMTS20P59510 1910 aa5.73□□□□□ -1.49
SDCBPP3-201ENST00000419629 FOXD2O60548 495 aaPredicted RBP5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 CILPO75339 1184 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 EFEMP2O95967 443 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 PDE6BP35913 854 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 ITGAEP38570 1179 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 DUSP4Q13115 394 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 SSPNQ14714 243 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 ZNF385BQ569K4 471 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 BNC2Q6ZN30 1099 aaPredicted RBP5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 ANKS4BQ8N8V4 417 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 MARCH10Q8NA82 808 aaPredicted RBP5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 KREMEN1Q96MU8 473 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 NOC4LQ9BVI4 516 aaKnown RBP5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 PRR36Q9H6K5 1346 aa5.72□□□□□ -1.49
SDCBPP3-201ENST00000419629 TRIM13O60858 407 aa5.71□□□□□ -1.5
SDCBPP3-201ENST00000419629 CHMP4BP1P59074 171 aa5.71□□□□□ -1.5
SDCBPP3-201ENST00000419629 EAPPQ56P03 285 aaPredicted RBP5.71□□□□□ -1.5
SDCBPP3-201ENST00000419629 TCERG1LQ5VWI1 586 aa5.71□□□□□ -1.5
SDCBPP3-201ENST00000419629 NLRX1Q86UT6 975 aa5.71□□□□□ -1.5
SDCBPP3-201ENST00000419629 VWCEQ96DN2 955 aa5.71□□□□□ -1.5
SDCBPP3-201ENST00000419629 ASPNQ9BXN1 380 aa5.71□□□□□ -1.5
SDCBPP3-201ENST00000419629 CHURC1-FNTBB4DL54 471 aa5.7□□□□□ -1.5
SDCBPP3-201ENST00000419629 TNNI2P48788 182 aa5.7□□□□□ -1.5
SDCBPP3-201ENST00000419629 PANK1Q8TE04 598 aa5.7□□□□□ -1.5
SDCBPP3-201ENST00000419629 REV1Q9UBZ9 1251 aa5.7□□□□□ -1.5
SDCBPP3-201ENST00000419629 OR14I1A6ND48 311 aa5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 F13A1P00488 732 aa5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 ST13P50502 369 aaKnown RBP5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 LMNB2Q03252 620 aa5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 CAMK2GQ13555 558 aaPredicted RBP5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 TAF1CQ15572 869 aaPredicted RBP5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 SIRT2Q8IXJ6 389 aa5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 USHBP1Q8N6Y0 703 aa5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 GATAD2BQ8WXI9 593 aa5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 CCDC74BQ96LY2 380 aa5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 MBD1Q9UIS9 605 aaPredicted RBP5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 JAG2Q9Y219 1238 aa5.69□□□□□ -1.5
SDCBPP3-201ENST00000419629 USP31Q70CQ4 1352 aa5.68□□□□□ -1.5
SDCBPP3-201ENST00000419629 HRKO00198 91 aa5.68□□□□□ -1.5
SDCBPP3-201ENST00000419629 RFXAPO00287 272 aa5.68□□□□□ -1.5
SDCBPP3-201ENST00000419629 DNAJA2O60884 412 aa5.68□□□□□ -1.5
SDCBPP3-201ENST00000419629 BPNT1O95861 308 aa5.68□□□□□ -1.5
SDCBPP3-201ENST00000419629 ADGRF1Q5T601 910 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms