RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 HOXC10Q9NYD6 342 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 MORF4L1Q9UBU8 362 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 TMX2Q9Y320 296 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 MGAMO43451 1857 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 ELNP15502 786 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 EN2P19622 333 aaPredicted RBP11.51□□□□□ -0.57
CTSA-205ENST00000419493 MAPK4P31152 587 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 CCNA1P78396 465 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 MTFR1Q15390 333 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 MCMDC2Q4G0Z9 681 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 SIAH1Q8IUQ4 282 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 LPAR1Q92633 364 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 FAM227BQ96M60 508 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 NUDT12Q9BQG2 462 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 VCPKMTQ9H867 229 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 RABGAP1Q9Y3P9 1069 aa11.51□□□□□ -0.57
CTSA-205ENST00000419493 A0A0D9SFI3 127 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 FLOT1O75955 427 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 TSPY3P0CV98 308 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 TSPY8P0CW00 308 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 CYP2B6P20813 491 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 CTDSPL2Q05D32 466 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
CTSA-205ENST00000419493 PLS1Q14651 629 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 PXYLP1Q8TE99 480 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 OSBPL3Q9H4L5 887 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 TOMM22Q9NS69 142 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 CLIP2Q9UDT6 1046 aa11.5□□□□□ -0.57
CTSA-205ENST00000419493 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
CTSA-205ENST00000419493 WDR46O15213 610 aaKnown RBP11.49□□□□□ -0.57
CTSA-205ENST00000419493 CCL5P13501 91 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 SDSP20132 328 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 MFAP1P55081 439 aaKnown RBP11.49□□□□□ -0.57
CTSA-205ENST00000419493 TFAP4Q01664 338 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 IRF5Q13568 498 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 FAM47AQ5JRC9 791 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 KIAA1755Q5JYT7 1200 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 VPS53Q5VIR6 699 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 CWC27Q6UX04 472 aaKnown RBP11.49□□□□□ -0.57
CTSA-205ENST00000419493 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 PLEKHH3Q7Z736 793 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 TICAM2Q86XR7 235 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 PORCNQ9H237 461 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 IVNS1ABPQ9Y6Y0 642 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 ROBO3Q96MS0 1386 aa11.49□□□□□ -0.57
CTSA-205ENST00000419493 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 RANBP6O60518 1105 aaKnown RBP11.48□□□□□ -0.57
CTSA-205ENST00000419493 INHAP05111 366 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 DSG3P32926 999 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 POTEEQ6S8J3 1075 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.48□□□□□ -0.57
CTSA-205ENST00000419493 UNC93B1Q9H1C4 597 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 NYAP2Q9P242 653 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 GJD2Q9UKL4 321 aa11.48□□□□□ -0.57
CTSA-205ENST00000419493 ISY1Q9ULR0 285 aaKnown RBP11.48□□□□□ -0.57
CTSA-205ENST00000419493 DOCK3Q8IZD9 2030 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 CCDC171Q6TFL3 1326 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 F5H6K3 240 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 HIP1O00291 1037 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 CNMDO75829 334 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 TTLL1O95922 423 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 FGAP02671 866 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 HSPD1P10809 573 aaKnown RBP11.47□□□□□ -0.57
CTSA-205ENST00000419493 KLRC3Q07444 240 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 RRP12Q5JTH9 1297 aaKnown RBP11.47□□□□□ -0.57
CTSA-205ENST00000419493 FAM83BQ5T0W9 1011 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
CTSA-205ENST00000419493 NCAPG2Q86XI2 1143 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 MB21D1Q8N884 522 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 ATG4CQ96DT6 458 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 CEP95Q96GE4 821 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 INCENPQ9NQS7 918 aa11.47□□□□□ -0.57
CTSA-205ENST00000419493 CTDP1Q9Y5B0 961 aaPredicted RBP11.47□□□□□ -0.57
CTSA-205ENST00000419493 FOXP2O15409 715 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 HMGCRP04035 888 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 GJB1P08034 283 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 RGS2P41220 211 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 HAND2P61296 217 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 ALX1Q15699 326 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 NEDD1Q8NHV4 660 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 NUP88Q99567 741 aaPredicted RBP11.46□□□□□ -0.57
CTSA-205ENST00000419493 MOV10L1Q9BXT6 1211 aaKnown RBP11.46□□□□□ -0.57
CTSA-205ENST00000419493 SPATC1LQ9H0A9 340 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 FBXO28Q9NVF7 368 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
CTSA-205ENST00000419493 SLC15A5A6NIM6 579 aa11.45□□□□□ -0.58
CTSA-205ENST00000419493 TFRCP02786 760 aaKnown RBP11.45□□□□□ -0.58
CTSA-205ENST00000419493 ZKSCAN1P17029 563 aaPredicted RBP11.45□□□□□ -0.58
CTSA-205ENST00000419493 ERCC3P19447 782 aa11.45□□□□□ -0.58
CTSA-205ENST00000419493 PTPREP23469 700 aa11.45□□□□□ -0.58
CTSA-205ENST00000419493 PDE4AP27815 886 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms