RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SNX11Q9Y5W9 270 aa7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 SHISA3A0PJX4 238 aa7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 GIPRP48546 466 aa7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 SNW1Q13573 536 aaKnown RBP7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 NBPF12Q5TAG4 269 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 MISP3Q96FF7 219 aa7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 FBXL18Q96ME1 805 aa7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 SLC6A18Q96N87 628 aa7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 SRRTQ9BXP5 876 aaKnown RBP7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 PRDM7Q9NQW5 492 aa7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 ADAMTS6Q9UKP5 1117 aa7.37□□□□□ -1.23
HMGB1P49-201ENST00000418882 SRFP11831 508 aa7.36□□□□□ -1.23
HMGB1P49-201ENST00000418882 IMPDH2P12268 514 aa7.36□□□□□ -1.23
HMGB1P49-201ENST00000418882 NBPF11Q86T75 865 aa7.36□□□□□ -1.23
HMGB1P49-201ENST00000418882 PPFIBP1Q86W92 1011 aa7.36□□□□□ -1.23
HMGB1P49-201ENST00000418882 SEC16BQ96JE7 1060 aa7.36□□□□□ -1.23
HMGB1P49-201ENST00000418882 COX4I2Q96KJ9 171 aa7.36□□□□□ -1.23
HMGB1P49-201ENST00000418882 SPATA32Q96LK8 384 aa7.36□□□□□ -1.23
HMGB1P49-201ENST00000418882 ASPNQ9BXN1 380 aa7.36□□□□□ -1.23
HMGB1P49-201ENST00000418882 LTBP3Q9NS15 1303 aa7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 C9IYK1 514 aa7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 UNC5AQ6ZN44 842 aa7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 TP53INP2Q8IXH6 220 aa7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 STK11IPQ8N1F8 1099 aa7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 TAB3Q8N5C8 712 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 PIWIL2Q8TC59 973 aaKnown RBP7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 UBE2FQ969M7 185 aa7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 TM9SF2Q99805 663 aa7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 ZSWIM5Q9P217 1185 aa7.35□□□□□ -1.23
HMGB1P49-201ENST00000418882 FGRP09769 529 aa7.34□□□□□ -1.23
HMGB1P49-201ENST00000418882 FUT4P22083 530 aa7.34□□□□□ -1.23
HMGB1P49-201ENST00000418882 GUCY2CP25092 1073 aa7.34□□□□□ -1.23
HMGB1P49-201ENST00000418882 EIF6P56537 245 aaKnown RBP7.34□□□□□ -1.23
HMGB1P49-201ENST00000418882 TDRD10Q5VZ19 366 aaKnown RBP7.34□□□□□ -1.23
HMGB1P49-201ENST00000418882 INTS3Q68E01 1043 aaKnown RBP7.34□□□□□ -1.23
HMGB1P49-201ENST00000418882 ASB11Q8WXH4 323 aa7.34□□□□□ -1.23
HMGB1P49-201ENST00000418882 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGB1P49-201ENST00000418882 CLEC3AO75596 197 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 ESR1P03372 595 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 CCNFP41002 786 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 IKZF1Q13422 519 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 GAB4Q2WGN9 574 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 NBPF9Q3BBW0 867 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 TMC3Q7Z5M5 1100 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 GPR62Q9BZJ7 368 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 ADGRE2Q9UHX3 823 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 MINPP1Q9UNW1 487 aa7.33□□□□□ -1.24
HMGB1P49-201ENST00000418882 A0A1W2PQH9 124 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 SHOXO15266 292 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 PLCL1Q15111 1095 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 CBLL1Q75N03 491 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 THAP5Q7Z6K1 395 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 TTC6Q86TZ1 520 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 MCF2L2Q86YR7 1114 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 ANAPC16Q96DE5 110 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 MBNL3Q9NUK0 354 aaKnown RBP7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 FAM86C1Q9NVL1 165 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 SUCOQ9UBS9 1254 aaKnown RBP7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 MRVI1Q9Y6F6 885 aa7.32□□□□□ -1.24
HMGB1P49-201ENST00000418882 RNASE1P07998 156 aaKnown RBP7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 TPP2P29144 1249 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 ZP2Q05996 745 aa7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 ANGEL2Q5VTE6 544 aaKnown RBP7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 CRBNQ96SW2 442 aa7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 PRDM14Q9GZV8 571 aa7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 CARS2Q9HA77 564 aaKnown RBP7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 KCNH3Q9ULD8 1083 aa7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 PCDHB10Q9UN67 800 aa7.31□□□□□ -1.24
HMGB1P49-201ENST00000418882 DNAJA1P31689 397 aaKnown RBP7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 PMS1P54277 932 aaKnown RBP7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 RNF4P78317 190 aa7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 ZNF792Q3KQV3 632 aa7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 AXDND1Q5T1B0 1012 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 DCAF15Q66K64 600 aa7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 TSPYL5Q86VY4 417 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 CPLX3Q8WVH0 158 aa7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 HDAC8Q9BY41 377 aa7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 MKRN2Q9H000 416 aaKnown RBP7.3□□□□□ -1.24
HMGB1P49-201ENST00000418882 ETFBP38117 255 aa7.29□□□□□ -1.24
HMGB1P49-201ENST00000418882 NMIQ13287 307 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P49-201ENST00000418882 C19orf47Q8N9M1 422 aaKnown RBP7.29□□□□□ -1.24
HMGB1P49-201ENST00000418882 AGBL5Q8NDL9 886 aa7.29□□□□□ -1.24
HMGB1P49-201ENST00000418882 ZNF214Q9UL59 606 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P49-201ENST00000418882 STRIP2Q9ULQ0 834 aa7.29□□□□□ -1.24
HMGB1P49-201ENST00000418882 PRAMEF1O95521 474 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 TP53P04637 393 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 ARID5AQ03989 594 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 AUHQ13825 339 aaKnown RBP7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 NAALADL2Q58DX5 795 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 CREG2Q8IUH2 290 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 SLC43A3Q8NBI5 491 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 LRRN4CLQ8ND94 238 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 OR6P1Q8NGX9 317 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 KLHL6Q8WZ60 621 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 GMLQ99445 158 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 C19orf73Q9NVV2 129 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 DUSP13Q9UII6 198 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 PCDHA11Q9Y5I1 949 aa7.28□□□□□ -1.24
HMGB1P49-201ENST00000418882 SMAD7O15105 426 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms