RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 VPS54Q9P1Q0 977 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 FBXO2Q9UK22 296 aaPredicted RBP10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 CEP131Q9UPN4 1083 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 A0A1B0GVL5 298 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 ECE2O60344 883 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 ZNF202O95125 648 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 CALML3P27482 149 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 CHRNA5P30532 468 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 CRKP46108 304 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 ANO6Q4KMQ2 910 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 GALNT17Q6IS24 598 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 CDC42EP5Q6NZY7 148 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 CCDC82Q8N4S0 544 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 FBXO41Q8TF61 875 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 IDI2Q9BXS1 227 aa10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 SRPRBQ9Y5M8 271 aaKnown RBP10.41□□□□□ -0.74
LINCMD1-201ENST00000418518 ATRNL1Q5VV63 1379 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 TRIM75PA6NK02 468 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 ESPNB1AK53 854 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 M0R2N6 131 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 SNHG28P0DPA3 235 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 MARCKSP29966 332 aaPredicted RBP10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 IQCB1Q15051 598 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 SLC4A8Q2Y0W8 1093 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 ZSCAN30Q86W11 494 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 METTL16Q86W50 562 aaKnown RBP10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 STAG2Q8N3U4 1231 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 CEP95Q96GE4 821 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 PSMD1Q99460 953 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 BPIFA3Q9BQP9 254 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 MXD3Q9BW11 206 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 DBNDD1Q9H9R9 158 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 RRAGDQ9NQL2 400 aaPredicted RBP10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 USP40Q9NVE5 1235 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 ANO10Q9NW15 660 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 KIAA1468Q9P260 1216 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 CCDC39Q9UFE4 941 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 USP25Q9UHP3 1055 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 TUBE1Q9UJT0 475 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 SERPINA10Q9UK55 444 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 NOL7Q9UMY1 257 aaKnown RBP10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 PCDHB6Q9Y5E3 794 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 COL4A5P29400 1685 aa10.4□□□□□ -0.74
LINCMD1-201ENST00000418518 G3V3G9 751 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 hCG_1984214I3L0E3 225 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 CYTH3O43739 400 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 SHMT1P34896 483 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 CLCN1P35523 988 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 SYKP43405 635 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 ZNF165P49910 485 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 SARM1Q6SZW1 724 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 ZNF713Q8N859 430 aaPredicted RBP10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 FBXW7Q969H0 707 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 DNAJC25Q9H1X3 360 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 VPS33BQ9H267 617 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 DHX36Q9H2U1 1008 aaKnown RBP10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 CABP5Q9NP86 173 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 MTMR4Q9NYA4 1195 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 SERPINB13Q9UIV8 391 aa10.39□□□□□ -0.75
LINCMD1-201ENST00000418518 hCG_1642624A0A1W2PR95 340 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 ESYT2A0FGR8 921 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 YDJCA8MPS7 323 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 F8W031 263 aaPredicted RBP10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 STXBP3O00186 592 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 AP5Z1O43299 807 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 ADCY5O95622 1261 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 HLA-DOAP06340 250 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 SCNN1DP51172 638 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 ATP2C1P98194 919 aaPredicted RBP10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 ASPRV1Q53RT3 343 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 CCDC93Q567U6 631 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 EARS2Q5JPH6 523 aaKnown RBP10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 C11orf57Q6ZUT1 292 aaPredicted RBP10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 CEP57L1Q8IYX8 460 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 FERMT2Q96AC1 680 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 CCDC17Q96LX7 622 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 CLIC6Q96NY7 704 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 SDF4Q9BRK5 362 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 RIOX1Q9H6W3 641 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 KCNQ5Q9NR82 932 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 BARHL2Q9NY43 387 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 PCDHA4Q9UN74 947 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 MYH7BA7E2Y1 1941 aa10.38□□□□□ -0.75
LINCMD1-201ENST00000418518 KLRF2D3W0D1 207 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 PDHBP11177 359 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 AKR1B1P15121 316 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 KCNA3P22001 575 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 CDC25BP30305 580 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 NLRP12P59046 1061 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 NLRP5P59047 1200 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 NFIAQ12857 509 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 SF3B2Q13435 895 aaKnown RBP10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 PICALMQ13492 652 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 AOC3Q16853 763 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 284.4 ms