RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 EFR3BQ9Y2G0 817 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 NWD1Q149M9 1564 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 ELNP15502 786 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 ATP2B1P20020 1258 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 GSK3AP49840 483 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 RPL6Q02878 288 aaKnown RBP7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 COL9A2Q14055 689 aaPredicted RBP7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 CWF19L2Q2TBE0 894 aaKnown RBP7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 EXOSC6Q5RKV6 272 aaKnown RBP7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 IGF2-ASQ6U949 168 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 SLITRK4Q8IW52 837 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 PUS7Q96PZ0 661 aaKnown RBP7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 POLR3GLQ9BT43 218 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 CDK19Q9BWU1 502 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 GINM1Q9NU53 330 aa7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 ZNF335Q9H4Z2 1342 aaPredicted RBP7.98□□□□□ -1.13
NIFKP3-201ENST00000417799 WISP1O95388 367 aa7.97□□□□□ -1.13
NIFKP3-201ENST00000417799 NASPP49321 788 aaPredicted RBP7.97□□□□□ -1.13
NIFKP3-201ENST00000417799 KIF4BQ2VIQ3 1234 aa7.97□□□□□ -1.13
NIFKP3-201ENST00000417799 REC114Q7Z4M0 266 aa7.97□□□□□ -1.13
NIFKP3-201ENST00000417799 RUSC1Q9BVN2 902 aa7.97□□□□□ -1.13
NIFKP3-201ENST00000417799 RAD18Q9NS91 495 aa7.97□□□□□ -1.13
NIFKP3-201ENST00000417799 NKTRP30414 1462 aaKnown RBP7.97□□□□□ -1.13
NIFKP3-201ENST00000417799 QRICH2Q9H0J4 1663 aa7.97□□□□□ -1.13
NIFKP3-201ENST00000417799 AOC2O75106 756 aa7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 SLFN14P0C7P3 912 aa7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 MCM4P33991 863 aa7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 CDK8P49336 464 aa7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 DDX10Q13206 875 aaKnown RBP7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 ACAD11Q709F0 780 aa7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 MCF2L2Q86YR7 1114 aa7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 WDR18Q9BV38 432 aa7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 MRPL18Q9H0U6 180 aaKnown RBP7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 SNCAIPQ9Y6H5 919 aa7.96□□□□□ -1.14
NIFKP3-201ENST00000417799 NCOA3Q9Y6Q9 1424 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 TULP4Q9NRJ4 1543 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 MEGF11A6BM72 1044 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 FGRP09769 529 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 SELPP16109 830 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 SOX9P48436 509 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 INPP5AQ14642 412 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 GRIK4Q16099 956 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 WIPI1Q5MNZ9 446 aaPredicted RBP7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 KIAA1211Q6ZU35 1233 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 HDXQ7Z353 690 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 ELMO3Q96BJ8 720 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 PLPPR2Q96GM1 343 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 SCARF2Q96GP6 870 aaPredicted RBP7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 TMPRSS13Q9BYE2 586 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 RNF208Q9H0X6 261 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 BRMS1Q9HCU9 246 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 TMEM94Q12767 1356 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 ADGRL3Q9HAR2 1447 aa7.95□□□□□ -1.14
NIFKP3-201ENST00000417799 SPATA31C1P0DKV0 1188 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 ZNF165P49910 485 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 NUTM2GQ5VZR2 741 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 LRFN4Q6PJG9 635 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 SHISA2Q6UWI4 295 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 UBXN4Q92575 508 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 C19orf44Q9H6X5 657 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 SYNGAP1Q96PV0 1343 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 STRCP1A6NGW2 1772 aa7.94□□□□□ -1.14
NIFKP3-201ENST00000417799 ADGRB2O60241 1585 aa7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 DCDC2CA8MYV0 355 aa7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 GFRA2O00451 464 aa7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 SSBP05455 408 aaKnown RBP eCLIP7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 GTF2F1P35269 517 aaKnown RBP eCLIP7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 ZC3H12AQ5D1E8 599 aaKnown RBP7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 AKAP4Q5JQC9 854 aa7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 REXO1Q8N1G1 1221 aaKnown RBP7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 DHX38Q92620 1227 aaKnown RBP7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 CYP4F12Q9HCS2 524 aa7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 STRIP2Q9ULQ0 834 aa7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 PCDHGC5Q9Y5F6 944 aa7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 LRRC7Q96NW7 1537 aa7.93□□□□□ -1.14
NIFKP3-201ENST00000417799 GRIN3BO60391 1043 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 ID3Q02535 119 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 GK5Q6ZS86 529 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 C12orf40Q86WS4 652 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 TMEM130Q8N3G9 435 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 CPLX3Q8WVH0 158 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 ARMC5Q96C12 935 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 SLC12A5Q9H2X9 1139 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 PANK3Q9H999 370 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 SUGCTQ9HAC7 445 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 POLR3KQ9Y2Y1 108 aaPredicted RBP7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 CSADQ9Y600 493 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 PRR36Q9H6K5 1346 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 NINLQ9Y2I6 1382 aa7.92□□□□□ -1.14
NIFKP3-201ENST00000417799 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
NIFKP3-201ENST00000417799 TMPRSS2O15393 492 aa7.91□□□□□ -1.14
NIFKP3-201ENST00000417799 ATF3P18847 181 aa7.91□□□□□ -1.14
NIFKP3-201ENST00000417799 COL8A1P27658 744 aa7.91□□□□□ -1.14
NIFKP3-201ENST00000417799 CLCQ05315 142 aa7.91□□□□□ -1.14
NIFKP3-201ENST00000417799 CYFIP1Q7L576 1253 aa7.91□□□□□ -1.14
NIFKP3-201ENST00000417799 AGGF1Q8N302 714 aaeCLIP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms