RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 CFHR5Q9BXR6 569 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 ASCC2Q9H1I8 757 aaPredicted RBP8.14□□□□□ -1.11
NCL-203ENST00000417652 RPAP3Q9H6T3 665 aaPredicted RBP8.14□□□□□ -1.11
NCL-203ENST00000417652 EFCC1Q9HA90 598 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 INCENPQ9NQS7 918 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 EMILIN3Q9NT22 766 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 ANAPC4Q9UJX5 808 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 STX8Q9UNK0 236 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 TRIM17Q9Y577 477 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 SIPA1L1O43166 1804 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 SGSM2O43147 1006 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 TTLL1O95922 423 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 PCP11498 1178 aaKnown RBP8.13□□□□□ -1.11
NCL-203ENST00000417652 VCAM1P19320 739 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 IKQ13123 557 aaPredicted RBP8.13□□□□□ -1.11
NCL-203ENST00000417652 PKN2Q16513 984 aaKnown RBP8.13□□□□□ -1.11
NCL-203ENST00000417652 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
NCL-203ENST00000417652 ANKRD13CQ8N6S4 541 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 NEDD1Q8NHV4 660 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 LPAR1Q92633 364 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 CHMP4CQ96CF2 233 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 P2RX7Q99572 595 aaKnown RBP8.13□□□□□ -1.11
NCL-203ENST00000417652 ESYT1Q9BSJ8 1104 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 PAGR1Q9BTK6 254 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 KRT23Q9C075 422 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 CNNM2Q9H8M5 875 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 ANO2Q9NQ90 1003 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 HOXC10Q9NYD6 342 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 NYAP2Q9P242 653 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 MTMR7Q9Y216 660 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 TMX2Q9Y320 296 aa8.13□□□□□ -1.11
NCL-203ENST00000417652 ROBO3Q96MS0 1386 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 ZMYM6O95789 1325 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 A0A1W2PRG0 241 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 F5H6K3 240 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 FOXP2O15409 715 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 ORC4O43929 436 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 FLOT1O75955 427 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 HOXA7P31268 230 aaPredicted RBP8.12□□□□□ -1.11
NCL-203ENST00000417652 PSMC4P43686 418 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 FCGRTP55899 365 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 HERVK_113P62684 666 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 KLRC3Q07444 240 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 PLS1Q14651 629 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 COG2Q14746 738 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 CCDC178Q5BJE1 867 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 WDR78Q5VTH9 848 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 C17orf99Q6UX52 265 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 CATSPERGQ6ZRH7 1159 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 RALYLQ86SE5 291 aaKnown RBP8.12□□□□□ -1.11
NCL-203ENST00000417652 IQCA1Q86XH1 822 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 GPRC5AQ8NFJ5 357 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
NCL-203ENST00000417652 STAG1Q8WVM7 1258 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 UBAC1Q9BSL1 405 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 VCPKMTQ9H867 229 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 MTMR4Q9NYA4 1195 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 PHIPQ8WWQ0 1821 aa8.12□□□□□ -1.11
NCL-203ENST00000417652 ERICH2A1L162 156 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 TNPO2O14787 897 aaKnown RBP8.11□□□□□ -1.11
NCL-203ENST00000417652 WDR46O15213 610 aaKnown RBP8.11□□□□□ -1.11
NCL-203ENST00000417652 KDM4AO75164 1064 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 ATXN8OSP0DMR3 200 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 CCNA1P78396 465 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 LACTBP83111 547 aaPredicted RBP8.11□□□□□ -1.11
NCL-203ENST00000417652 PTH1RQ03431 593 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 FAM83BQ5T0W9 1011 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 RNF20Q5VTR2 975 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 SLFN13Q68D06 897 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 SIAH1Q8IUQ4 282 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 LRRC47Q8N1G4 583 aaKnown RBP8.11□□□□□ -1.11
NCL-203ENST00000417652 COA7Q96BR5 231 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 C12orf42Q96LP6 360 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 MCOLN1Q9GZU1 580 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 BIN2Q9UBW5 565 aaPredicted RBP8.11□□□□□ -1.11
NCL-203ENST00000417652 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.11□□□□□ -1.11
NCL-203ENST00000417652 RBM8AQ9Y5S9 174 aaKnown RBP8.11□□□□□ -1.11
NCL-203ENST00000417652 LAMB1P07942 1786 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 DDX60LQ5H9U9 1706 aaKnown RBP8.11□□□□□ -1.11
NCL-203ENST00000417652 PTPRFP10586 1907 aa8.11□□□□□ -1.11
NCL-203ENST00000417652 CCDC85CA6NKD9 419 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 B4E1Z4 1266 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 NMT2O60551 498 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 ZBED4O75132 1171 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 GNRH1P01148 92 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 BCRP11274 1271 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 ZKSCAN1P17029 563 aaPredicted RBP8.1□□□□□ -1.11
NCL-203ENST00000417652 MCCP23508 829 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 SLC1A4P43007 532 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 NT5C2P49902 561 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 SART3Q15020 963 aaKnown RBP8.1□□□□□ -1.11
NCL-203ENST00000417652 FAM110CQ1W6H9 321 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 CCDC96Q2M329 555 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 OTOP1Q7RTM1 612 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 TBC1D10CQ8IV04 446 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 NCOA7Q8NI08 942 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 RAET1EQ8TD07 263 aa8.1□□□□□ -1.11
NCL-203ENST00000417652 MAP4K1Q92918 833 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms