RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 ERVK-24P63145 666 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 PPARAQ07869 468 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 LBX2Q6XYB7 198 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 ZNF333Q96JL9 665 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 SEC62Q99442 399 aaKnown RBP13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 EPB41L4AQ9HCS5 686 aaPredicted RBP13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 ZMYM6O95789 1325 aa13.02□□□□□ -0.33
SNRNP25-204ENST00000417493 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 SDSP20132 328 aa13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 RASA1P20936 1047 aa13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 PRKCZQ05513 592 aa13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 NKX2-3Q8TAU0 364 aa13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 RUFY2Q8WXA3 655 aa13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 IVNS1ABPQ9Y6Y0 642 aa13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 CCDC171Q6TFL3 1326 aa13.01□□□□□ -0.33
SNRNP25-204ENST00000417493 RAD21O60216 631 aa13□□□□□ -0.33
SNRNP25-204ENST00000417493 ADCY3O60266 1144 aa13□□□□□ -0.33
SNRNP25-204ENST00000417493 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
SNRNP25-204ENST00000417493 TTLL1O95922 423 aa13□□□□□ -0.33
SNRNP25-204ENST00000417493 FLT3LGP49771 235 aa13□□□□□ -0.33
SNRNP25-204ENST00000417493 NMIQ13287 307 aaPredicted RBP13□□□□□ -0.33
SNRNP25-204ENST00000417493 NUDT12Q9BQG2 462 aa13□□□□□ -0.33
SNRNP25-204ENST00000417493 RNF41Q9H4P4 317 aaPredicted RBP13□□□□□ -0.33
SNRNP25-204ENST00000417493 ANAPC4Q9UJX5 808 aa13□□□□□ -0.33
SNRNP25-204ENST00000417493 PARP14Q460N5 1801 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 PLIN4Q96Q06 1357 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 TSPY2A6NKD2 308 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 FLOT1O75955 427 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 NEFLP07196 543 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 COPB2P35606 906 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 EVX2Q03828 476 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 CCDC129Q6ZRS4 1044 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 FAM227BQ96M60 508 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 SLC5A4Q9NY91 659 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 RBPJLQ9UBG7 517 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 CTNNA3Q9UI47 895 aa12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
SNRNP25-204ENST00000417493 LAMA4Q16363 1823 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 A0A0D9SFI3 127 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 HSPD1P10809 573 aaKnown RBP12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 CTGFP29279 349 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 DSG3P32926 999 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 RGS2P41220 211 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 TFAP4Q01664 338 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 PLEKHH3Q7Z736 793 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 CLIP2Q9UDT6 1046 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 RLFQ13129 1914 aa12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
SNRNP25-204ENST00000417493 HTTP42858 3142 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 PLXNB2O15031 1838 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 COL11A1P12107 1806 aaPredicted RBP12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 RAD50Q92878 1312 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 STRNO43815 780 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 ORC4O43929 436 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 RANBP6O60518 1105 aaKnown RBP12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 PRDM1O75626 825 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 SLC25A27O95847 323 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 FGAP02671 866 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 HMGCRP04035 888 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 FDX1P10109 184 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 XRCC5P13010 732 aaKnown RBP12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 CAP1Q01518 475 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 CCDC178Q5BJE1 867 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 SPICE1Q8N0Z3 855 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 SHCBP1Q8NEM2 672 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 MKL1Q969V6 931 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 MROH8Q9H579 483 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 MTMR4Q9NYA4 1195 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 GABRQQ9UN88 632 aa12.97□□□□□ -0.33
SNRNP25-204ENST00000417493 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 SLC15A5A6NIM6 579 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 F5H6K3 240 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 ZNF213O14771 459 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 KLRC3Q07444 240 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 MFSD6Q6ZSS7 791 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 GPR142Q7Z601 462 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 GMCL1P1Q8NEA9 526 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 CEP95Q96GE4 821 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 DSCC1Q9BVC3 393 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 RNF208Q9H0X6 261 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 TXNRD2Q9NNW7 524 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 FEM1BQ9UK73 627 aa12.96□□□□□ -0.33
SNRNP25-204ENST00000417493 CENPFP49454 3210 aa12.96□□□□□ -0.34
SNRNP25-204ENST00000417493 IGKV6D-41A0A0C4DH26 115 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms