RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 CD99L2Q8TCZ2 262 aa13.89□□□□□ -0.19
GABRE-202ENST00000417300 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
GABRE-202ENST00000417300 TDRD3Q9H7E2 651 aaKnown RBP13.89□□□□□ -0.19
GABRE-202ENST00000417300 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
GABRE-202ENST00000417300 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
GABRE-202ENST00000417300 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 TSPY2A6NKD2 308 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 GJB2P29033 226 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 CCDC178Q5BJE1 867 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 SMARCC2Q8TAQ2 1214 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 MKNK2Q9HBH9 465 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 SENP2Q9HC62 589 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 TCP11L1Q9NUJ3 509 aa13.88□□□□□ -0.19
GABRE-202ENST00000417300 GREB1LQ9C091 1923 aaPredicted RBP13.88□□□□□ -0.19
GABRE-202ENST00000417300 ZBTB43O43298 467 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 DHX16O60231 1041 aaKnown RBP13.87□□□□□ -0.19
GABRE-202ENST00000417300 PDIA4P13667 645 aaKnown RBP13.87□□□□□ -0.19
GABRE-202ENST00000417300 CACNB3P54284 484 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 TTLL12Q14166 644 aaPredicted RBP13.87□□□□□ -0.19
GABRE-202ENST00000417300 KIF4BQ2VIQ3 1234 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 ZNF444Q8N0Y2 327 aaPredicted RBP13.87□□□□□ -0.19
GABRE-202ENST00000417300 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
GABRE-202ENST00000417300 NSUN7Q8NE18 718 aaKnown RBP13.87□□□□□ -0.19
GABRE-202ENST00000417300 ZKSCAN3Q9BRR0 538 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 HTATIP2Q9BUP3 242 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 MYOZ2Q9NPC6 264 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 MTMR10Q9NXD2 777 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 ZNF70Q9UC06 446 aaPredicted RBP13.87□□□□□ -0.19
GABRE-202ENST00000417300 SERPINB13Q9UIV8 391 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
GABRE-202ENST00000417300 MYO1BO43795 1136 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
GABRE-202ENST00000417300 CCT2P78371 535 aaKnown RBP13.86□□□□□ -0.19
GABRE-202ENST00000417300 HMGN5P82970 282 aaKnown RBP13.86□□□□□ -0.19
GABRE-202ENST00000417300 TFAP4Q01664 338 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 IFIT1BQ5T764 474 aaKnown RBP13.86□□□□□ -0.19
GABRE-202ENST00000417300 SYNE3Q6ZMZ3 975 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 SH3BP5LQ7L8J4 393 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 METTL16Q86W50 562 aaKnown RBP13.86□□□□□ -0.19
GABRE-202ENST00000417300 DGKHQ86XP1 1220 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 ZFPM1Q8IX07 1006 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 NEDD1Q8NHV4 660 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 PI4KBQ9UBF8 816 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 RAPGEFL1Q9UHV5 662 aa13.86□□□□□ -0.19
GABRE-202ENST00000417300 NAP1L2Q9ULW6 460 aaPredicted RBP13.86□□□□□ -0.19
GABRE-202ENST00000417300 DDTLA6NHG4 134 aaPredicted RBP13.85□□□□□ -0.19
GABRE-202ENST00000417300 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 WNT10BO00744 389 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 DDAH1O94760 285 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 CTDNEP1O95476 244 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 BRD1O95696 1058 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 TSPY3P0CV98 308 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 TSPY8P0CW00 308 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 PDCP20941 246 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 PPP2R5BQ15173 497 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 FAM83AQ86UY5 434 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 ZNF654Q8IZM8 581 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 FAM151AQ8WW52 585 aa13.85□□□□□ -0.19
GABRE-202ENST00000417300 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
GABRE-202ENST00000417300 CLRN2A0PK11 232 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 PTPDC1A2A3K4 754 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 JAK2O60674 1132 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 CALM1P0DP23 149 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 CALM2P0DP24 149 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 CALM3P0DP25 149 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 SHMT1P34896 483 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 NOVP48745 357 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 TCP10Q12799 353 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 PKP1Q13835 747 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 RCSD1Q6JBY9 416 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 FOXP4Q8IVH2 680 aaPredicted RBP13.84□□□□□ -0.19
GABRE-202ENST00000417300 IL17RBQ9NRM6 502 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 KIF3AQ9Y496 699 aa13.84□□□□□ -0.19
GABRE-202ENST00000417300 ASTN2O75129 1339 aaPredicted RBP13.84□□□□□ -0.19
GABRE-202ENST00000417300 CPLX1O14810 134 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 STX6O43752 255 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 NMT2O60551 498 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 CDKL5O76039 1030 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 SYT1P21579 422 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 INHBEP58166 350 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.2
GABRE-202ENST00000417300 CPLX2Q6PUV4 134 aaKnown RBP13.83□□□□□ -0.2
GABRE-202ENST00000417300 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 ZSCAN29Q8IWY8 852 aaPredicted RBP13.83□□□□□ -0.2
GABRE-202ENST00000417300 TNPO1Q92973 898 aaKnown RBP13.83□□□□□ -0.2
GABRE-202ENST00000417300 CCDC17Q96LX7 622 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 DNAJC18Q9H819 358 aa13.83□□□□□ -0.2
GABRE-202ENST00000417300 FAM217BQ9NTX9 383 aaPredicted RBP13.83□□□□□ -0.2
GABRE-202ENST00000417300 IGKV6D-41A0A0C4DH26 115 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 CCDC196A0A1B0GTZ2 297 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 RXRAP19793 462 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 CDC27P30260 824 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms