RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 LSRQ86X29 649 aaPredicted RBP6.82□□□□□ -1.32
TTC39DP-201ENST00000416781 SHDQ96IW2 340 aa6.82□□□□□ -1.32
TTC39DP-201ENST00000416781 TSPAN18Q96SJ8 248 aa6.82□□□□□ -1.32
TTC39DP-201ENST00000416781 FAN1Q9Y2M0 1017 aa6.82□□□□□ -1.32
TTC39DP-201ENST00000416781 MRVI1Q9Y6F6 885 aa6.82□□□□□ -1.32
TTC39DP-201ENST00000416781 U2SURPO15042 1029 aaKnown RBP6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 NRDCO43847 1150 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 RAG1P15918 1043 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 SEZ6L2Q6UXD5 910 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 SLFN12Q8IYM2 578 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 PHACTR4Q8IZ21 702 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 RBBP8NLQ8NC74 664 aaPredicted RBP6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 OR6P1Q8NGX9 317 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 CXorf38Q8TB03 319 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 C1GALT1Q9NS00 363 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 H2AFB1P0C5Y9 115 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 H2AFB2P0C5Z0 115 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 GIPRP48546 466 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 C4orf46Q504U0 113 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 NLRC3Q7RTR2 1065 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 TOP6BLQ8N6T0 577 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 MFSD2AQ8NA29 543 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 MKL1Q969V6 931 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 ATG4CQ96DT6 458 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 TBC1D32Q96NH3 1257 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 MIPEPQ99797 713 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 KRTAP9-9Q9BYP9 154 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 NUB1Q9Y5A7 615 aa6.81□□□□□ -1.32
TTC39DP-201ENST00000416781 EPB41L2O43491 1005 aaKnown RBP6.8□□□□□ -1.32
TTC39DP-201ENST00000416781 GTF2F1P35269 517 aaKnown RBP eCLIP6.8□□□□□ -1.32
TTC39DP-201ENST00000416781 GIMAP7Q8NHV1 300 aa6.8□□□□□ -1.32
TTC39DP-201ENST00000416781 CYB5D2Q8WUJ1 264 aa6.8□□□□□ -1.32
TTC39DP-201ENST00000416781 TM9SF2Q99805 663 aa6.8□□□□□ -1.32
TTC39DP-201ENST00000416781 ZNF408Q9H9D4 720 aa6.8□□□□□ -1.32
TTC39DP-201ENST00000416781 STK10O94804 968 aaKnown RBP6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 NME1P15531 152 aaKnown RBP6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 RHBDL3P58872 404 aa6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 CDCP2Q5VXM1 449 aa6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 RNF43Q68DV7 783 aa6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 RUFY4Q6ZNE9 571 aa6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 FBXL6Q8N531 539 aa6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 MFSD14AQ96MC6 490 aa6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 CNNM2Q9H8M5 875 aa6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 GNL3LQ9NVN8 582 aaKnown RBP6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 COMMD10Q9Y6G5 202 aa6.79□□□□□ -1.32
TTC39DP-201ENST00000416781 FAM87AP0C7U9 286 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 BDNFP23560 247 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 GUCY2CP25092 1073 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 POLR2BP30876 1174 aaKnown RBP6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 ADMP35318 185 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 NFIAQ12857 509 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 RSPO4Q2I0M5 234 aaPredicted RBP6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 ZNF280DQ6N043 979 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 LETMD1Q6P1Q0 360 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 ZAR1Q86SH2 424 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 NOP9Q86U38 636 aaKnown RBP6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 FAM169BQ8N8A8 192 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 DHX38Q92620 1227 aaKnown RBP6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 CCDC74BQ96LY2 380 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 KIF2CQ99661 725 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 DUSP23Q9BVJ7 150 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 HDAC5Q9UQL6 1122 aa6.78□□□□□ -1.32
TTC39DP-201ENST00000416781 TNFRSF10CO14798 259 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 GSC2O15499 205 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 SLITRK5O94991 958 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 ZRANB2O95218 330 aaKnown RBP eCLIP6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 GBP1P32455 592 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 ETFBP38117 255 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 GYS2P54840 703 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 NKAPLQ5M9Q1 402 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 AMOTL1Q8IY63 956 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 PNISRQ8TF01 805 aaKnown RBP6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 ARMC5Q96C12 935 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 DBNDD2Q9BQY9 259 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 CHPF2Q9P2E5 772 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 PRKAG3Q9UGI9 489 aa6.77□□□□□ -1.32
TTC39DP-201ENST00000416781 FAM86C2PA6NEL3 165 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 GOLIM4O00461 696 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 SMAD7O15105 426 aaKnown RBP6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 DYRK3O43781 588 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 LEFTY1O75610 366 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 FSTP19883 344 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 CHMP4BP1P59074 171 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 IGBP1P78318 339 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 PPP2R5EQ16537 467 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 TNNI3KQ59H18 835 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 EGFLAMQ63HQ2 1017 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 TAB3Q8N5C8 712 aaPredicted RBP6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 BAHD1Q8TBE0 780 aaPredicted RBP6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 GATA6Q92908 595 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 TRIM44Q96DX7 344 aaPredicted RBP6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 SENP7Q9BQF6 1050 aa6.77□□□□□ -1.33
TTC39DP-201ENST00000416781 RGS13O14921 159 aa6.76□□□□□ -1.33
TTC39DP-201ENST00000416781 IGLV1-40P01703 118 aa6.76□□□□□ -1.33
TTC39DP-201ENST00000416781 ACRP10323 421 aa6.76□□□□□ -1.33
TTC39DP-201ENST00000416781 C11orf96Q7Z7L8 435 aa6.76□□□□□ -1.33
TTC39DP-201ENST00000416781 OTUD6BQ8N6M0 293 aa6.76□□□□□ -1.33
TTC39DP-201ENST00000416781 C19orf47Q8N9M1 422 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms