RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 AMOTL1Q8IY63 956 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 DYNLL2Q96FJ2 89 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 PFASO15067 1338 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 HOXC6P09630 235 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 ATP2B2Q01814 1243 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 GDF15Q99988 308 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 ARHGEF10LQ9HCE6 1279 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 FLRT1Q9NZU1 646 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 COL6A1P12109 1028 aa17.39■□□□□ 0.37
PAF1-202ENST00000416728 AKR1B1P15121 316 aa17.39■□□□□ 0.37
PAF1-202ENST00000416728 SYN1P17600 705 aa17.39■□□□□ 0.37
PAF1-202ENST00000416728 ICA1Q05084 483 aa17.39■□□□□ 0.37
PAF1-202ENST00000416728 UBE3CQ15386 1083 aa17.39■□□□□ 0.37
PAF1-202ENST00000416728 LPAR1Q92633 364 aa17.39■□□□□ 0.37
PAF1-202ENST00000416728 CCDC17Q96LX7 622 aa17.39■□□□□ 0.37
PAF1-202ENST00000416728 MOV10L1Q9BXT6 1211 aaKnown RBP17.39■□□□□ 0.37
PAF1-202ENST00000416728 SH2D4AQ9H788 454 aa17.39■□□□□ 0.37
PAF1-202ENST00000416728 USP17L12C9JPN9 530 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 USP17L21D6R901 530 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 BMP8BP34820 402 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 C12orf60Q5U649 245 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 ZSCAN25Q6NSZ9 544 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 CLEC10AQ8IUN9 316 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 MB21D1Q8N884 522 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 NPLOC4Q8TAT6 608 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 SPATC1LQ9H0A9 340 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 TMX2Q9Y320 296 aa17.38■□□□□ 0.37
PAF1-202ENST00000416728 CYP2D7A0A087X1C5 515 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 STRNO43815 780 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 MSCO60682 206 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 FLOT1O75955 427 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 CHGBP05060 677 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 CNGA1P29973 690 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 CYP2C19P33261 490 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 CDK8P49336 464 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 KIAA1755Q5JYT7 1200 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 DPP9Q86TI2 863 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 SPICE1Q8N0Z3 855 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 SHCBP1Q8NEM2 672 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 VCPKMTQ9H867 229 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 DDX20Q9UHI6 824 aaKnown RBP17.37■□□□□ 0.37
PAF1-202ENST00000416728 SLC4A4Q9Y6R1 1079 aa17.37■□□□□ 0.37
PAF1-202ENST00000416728 SOX1O00570 391 aaPredicted RBP17.36■□□□□ 0.37
PAF1-202ENST00000416728 ERCC3P19447 782 aa17.36■□□□□ 0.37
PAF1-202ENST00000416728 ADORA2AP29274 412 aa17.36■□□□□ 0.37
PAF1-202ENST00000416728 DSG3P32926 999 aa17.36■□□□□ 0.37
PAF1-202ENST00000416728 MAGEA10P43363 369 aaPredicted RBP17.36■□□□□ 0.37
PAF1-202ENST00000416728 C20orf194Q5TEA3 1177 aa17.36■□□□□ 0.37
PAF1-202ENST00000416728 C16orf86Q6ZW13 317 aa17.36■□□□□ 0.37
PAF1-202ENST00000416728 SIAH1Q8IUQ4 282 aa17.36■□□□□ 0.37
PAF1-202ENST00000416728 ALPK3Q96L96 1907 aa17.36■□□□□ 0.37
PAF1-202ENST00000416728 SMIM22K7EJ46 135 aa17.35■□□□□ 0.37
PAF1-202ENST00000416728 WDR46O15213 610 aaKnown RBP17.35■□□□□ 0.37
PAF1-202ENST00000416728 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
PAF1-202ENST00000416728 PLS1Q14651 629 aa17.35■□□□□ 0.37
PAF1-202ENST00000416728 LRRC26Q2I0M4 334 aa17.35■□□□□ 0.37
PAF1-202ENST00000416728 ATG4CQ96DT6 458 aa17.35■□□□□ 0.37
PAF1-202ENST00000416728 OLFML2BQ68BL8 750 aa17.34■□□□□ 0.37
PAF1-202ENST00000416728 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
PAF1-202ENST00000416728 NCAPG2Q86XI2 1143 aa17.34■□□□□ 0.37
PAF1-202ENST00000416728 LRCH3Q96II8 777 aa17.34■□□□□ 0.37
PAF1-202ENST00000416728 PUS7LQ9H0K6 701 aaKnown RBP17.34■□□□□ 0.37
PAF1-202ENST00000416728 MROH8Q9H579 483 aa17.34■□□□□ 0.37
PAF1-202ENST00000416728 KANSL2Q9H9L4 492 aa17.34■□□□□ 0.37
PAF1-202ENST00000416728 ECHDC1Q9NTX5 307 aa17.34■□□□□ 0.37
PAF1-202ENST00000416728 SLC5A4Q9NY91 659 aa17.34■□□□□ 0.37
PAF1-202ENST00000416728 ARPP21Q9UBL0 812 aaPredicted RBP17.34■□□□□ 0.37
PAF1-202ENST00000416728 SZT2Q5T011 3432 aa17.34■□□□□ 0.37
PAF1-202ENST00000416728 CYBAP13498 195 aa17.33■□□□□ 0.36
PAF1-202ENST00000416728 EEF2P13639 858 aaKnown RBP17.33■□□□□ 0.36
PAF1-202ENST00000416728 CTR9Q6PD62 1173 aa17.33■□□□□ 0.36
PAF1-202ENST00000416728 TRPV1Q8NER1 839 aa17.33■□□□□ 0.36
PAF1-202ENST00000416728 SENP6Q9GZR1 1112 aaPredicted RBP17.33■□□□□ 0.36
PAF1-202ENST00000416728 COBLO75128 1261 aa17.32■□□□□ 0.36
PAF1-202ENST00000416728 IGHA2P01877 340 aa17.32■□□□□ 0.36
PAF1-202ENST00000416728 ABRAQ8N0Z2 381 aa17.32■□□□□ 0.36
PAF1-202ENST00000416728 GPATCH3Q96I76 525 aa17.32■□□□□ 0.36
PAF1-202ENST00000416728 UBE2OQ9C0C9 1292 aaKnown RBP17.32■□□□□ 0.36
PAF1-202ENST00000416728 DNM1LO00429 736 aa17.31■□□□□ 0.36
PAF1-202ENST00000416728 TDHQ8IZJ6 230 aa17.31■□□□□ 0.36
PAF1-202ENST00000416728 STRBPQ96SI9 672 aaKnown RBP17.31■□□□□ 0.36
PAF1-202ENST00000416728 GOPCQ9HD26 462 aa17.31■□□□□ 0.36
PAF1-202ENST00000416728 A0A0G2JMZ2 1700 aa17.31■□□□□ 0.36
PAF1-202ENST00000416728 RAD21O60216 631 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 SLC25A27O95847 323 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 FCER1AP12319 257 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 TMEM132BQ14DG7 1078 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 KBTBD3Q8NAB2 608 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 ARRDC4Q8NCT1 418 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 FBXO28Q9NVF7 368 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 LAMA3Q16787 3333 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 ZNF236Q9UL36 1845 aa17.3■□□□□ 0.36
PAF1-202ENST00000416728 SEPT4O43236 478 aa17.29■□□□□ 0.36
PAF1-202ENST00000416728 ATN1P54259 1190 aaPredicted RBP17.29■□□□□ 0.36
PAF1-202ENST00000416728 LRIT3Q3SXY7 679 aa17.29■□□□□ 0.36
PAF1-202ENST00000416728 GIMAP6Q6P9H5 292 aa17.29■□□□□ 0.36
PAF1-202ENST00000416728 APPBP2Q92624 585 aa17.29■□□□□ 0.36
PAF1-202ENST00000416728 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms