RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 NCAPG2Q86XI2 1143 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 CLEC10AQ8IUN9 316 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 SYMPKQ92797 1274 aaKnown RBP11.45□□□□□ -0.58
LINC01238-201ENST00000416204 KIAA1683Q9H0B3 1180 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 GINM1Q9NU53 330 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 TLR7Q9NYK1 1049 aaKnown RBP11.45□□□□□ -0.58
LINC01238-201ENST00000416204 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
LINC01238-201ENST00000416204 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 A0A1W2PRG0 241 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 GRXCR1A8MXD5 290 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 PGK2P07205 417 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 GNAI3P08754 354 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 CLTBP09497 229 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 RAG1P15918 1043 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
LINC01238-201ENST00000416204 GUCY1A2P33402 732 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 SHMT1P34896 483 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 PBX2P40425 430 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 PLCD1P51178 756 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 USP14P54578 494 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 OS9Q13438 667 aaPredicted RBP11.44□□□□□ -0.58
LINC01238-201ENST00000416204 CCDC85BQ15834 202 aaPredicted RBP11.44□□□□□ -0.58
LINC01238-201ENST00000416204 TNNI3KQ59H18 835 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 ATF7IPQ6VMQ6 1270 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 SPICE1Q8N0Z3 855 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 MAGEB6Q8N7X4 407 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 SPATC1LQ9H0A9 340 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 XPNPEP3Q9NQH7 507 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 SERPINB13Q9UIV8 391 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 FPGT-TNNI3KV9GXZ4 949 aa11.44□□□□□ -0.58
LINC01238-201ENST00000416204 REV3LO60673 3130 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 FPGSQ05932 587 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 MTX1Q13505 466 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 CCDC158Q5M9N0 1113 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 LBX2Q6XYB7 198 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 ATG4CQ96DT6 458 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
LINC01238-201ENST00000416204 ZNF576Q9H609 170 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 CABP5Q9NP86 173 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 TMEM39AQ9NV64 488 aa11.43□□□□□ -0.58
LINC01238-201ENST00000416204 MYO5AQ9Y4I1 1855 aaKnown RBP11.42□□□□□ -0.58
LINC01238-201ENST00000416204 A0A1W2PQ45 241 aaPredicted RBP11.42□□□□□ -0.58
LINC01238-201ENST00000416204 A0A1W2PQY0 241 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 GNAI2P04899 355 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 CYP2D6P10635 497 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 COG2Q14746 738 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 CLUAP1Q96AJ1 413 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 TIFAQ96CG3 184 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 MAML3Q96JK9 1138 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 PRDM12Q9H4Q4 367 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 ANTXR1Q9H6X2 564 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 C1orf115Q9H7X2 142 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 FOCADQ5VW36 1801 aa11.42□□□□□ -0.58
LINC01238-201ENST00000416204 BCAR3O75815 825 aa11.41□□□□□ -0.58
LINC01238-201ENST00000416204 FLOT1O75955 427 aa11.41□□□□□ -0.58
LINC01238-201ENST00000416204 POLR3DP05423 398 aaPredicted RBP11.41□□□□□ -0.58
LINC01238-201ENST00000416204 RARBP10826 455 aa11.41□□□□□ -0.58
LINC01238-201ENST00000416204 RARSP54136 660 aaKnown RBP11.41□□□□□ -0.58
LINC01238-201ENST00000416204 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
LINC01238-201ENST00000416204 CCDC129Q6ZRS4 1044 aa11.41□□□□□ -0.58
LINC01238-201ENST00000416204 SLC44A5Q8NCS7 719 aa11.41□□□□□ -0.58
LINC01238-201ENST00000416204 ADAMTS19Q8TE59 1207 aa11.41□□□□□ -0.58
LINC01238-201ENST00000416204 FRAT1Q92837 279 aaPredicted RBP11.41□□□□□ -0.58
LINC01238-201ENST00000416204 NECAB3Q96P71 396 aaPredicted RBP11.41□□□□□ -0.58
LINC01238-201ENST00000416204 DBNLQ9UJU6 430 aaKnown RBP11.41□□□□□ -0.58
LINC01238-201ENST00000416204 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
LINC01238-201ENST00000416204 KIAA0355O15063 1070 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 ACRP10323 421 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 IGFBP4P22692 258 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 FAAP100Q0VG06 881 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 TTC6Q86TZ1 520 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC01238-201ENST00000416204 BCL11AQ9H165 835 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 EHD4Q9H223 541 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 HOXC10Q9NYD6 342 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 MYH1P12882 1939 aa11.4□□□□□ -0.58
LINC01238-201ENST00000416204 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.39□□□□□ -0.59
LINC01238-201ENST00000416204 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.39□□□□□ -0.59
LINC01238-201ENST00000416204 MYADML2A6NDP7 307 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 SMIM22K7EJ46 135 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 STRNO43815 780 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 RAD21O60216 631 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 SURF6O75683 361 aaKnown RBP11.39□□□□□ -0.59
LINC01238-201ENST00000416204 FCER1AP12319 257 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 DSG3P32926 999 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 ADGRE1Q14246 886 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 TMEM132BQ14DG7 1078 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 C1orf53Q5VUE5 145 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 C16orf59Q7L2K0 433 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 RNF180Q86T96 592 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 MICALL1Q8N3F8 863 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 SHCBP1Q8NEM2 672 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 DYNLL2Q96FJ2 89 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 GAS2L1Q99501 681 aaPredicted RBP11.39□□□□□ -0.59
LINC01238-201ENST00000416204 MMP19Q99542 508 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 PBX4Q9BYU1 374 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 FBXO28Q9NVF7 368 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms