RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 MARCH6O60337 910 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 C1QTNF8P60827 252 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 NRG1Q02297 640 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-204ENST00000415749 ZNF252P-AS1Q0IIN9 211 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 TCEAL1Q15170 157 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 MAP1SQ66K74 1059 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-204ENST00000415749 ZNF746Q6NUN9 644 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-204ENST00000415749 ACAD11Q709F0 780 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 CCDC84Q86UT8 332 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-204ENST00000415749 STK35Q8TDR2 534 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 RHOVQ96L33 236 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 KCNK4Q9NYG8 393 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 IQGAP3Q86VI3 1631 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 RPGRIP1LQ68CZ1 1315 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 NAIPQ13075 1403 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 C9orf172C9J069 976 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 TFE3P19532 575 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-204ENST00000415749 EIF4A3P38919 411 aaKnown RBP8.31□□□□□ -1.08
EPHA4-204ENST00000415749 CAMK2GQ13555 558 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-204ENST00000415749 SNAP47Q5SQN1 464 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 JAZF1Q86VZ6 243 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 TRIM42Q8IWZ5 723 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 UBASH3BQ8TF42 649 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 ACSBG1Q96GR2 724 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 GPATCH3Q96I76 525 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.08
EPHA4-204ENST00000415749 RUSC1Q9BVN2 902 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 ZC3H12CQ9C0D7 883 aaKnown RBP8.31□□□□□ -1.08
EPHA4-204ENST00000415749 RNF208Q9H0X6 261 aa8.31□□□□□ -1.08
EPHA4-204ENST00000415749 SUPT16HQ9Y5B9 1047 aaKnown RBP8.31□□□□□ -1.08
EPHA4-204ENST00000415749 SPATA31A5Q5VU36 1347 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 SPATA31A7Q8IWB4 1347 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 NEXMIFQ5QGS0 1516 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 USP32Q8NFA0 1604 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 F6X3S4 739 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 PF4P02776 101 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 FGRP09769 529 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 GRIK4Q16099 956 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 EXOSC6Q5RKV6 272 aaKnown RBP8.3□□□□□ -1.08
EPHA4-204ENST00000415749 NOL8Q76FK4 1167 aaKnown RBP8.3□□□□□ -1.08
EPHA4-204ENST00000415749 KIAA0825Q8IV33 1275 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 TMEM130Q8N3G9 435 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 GRIN3AQ8TCU5 1115 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 LENG1Q96BZ8 264 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-204ENST00000415749 SPON2Q9BUD6 331 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 RAD18Q9NS91 495 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 PARD3Q8TEW0 1356 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 NINLQ9Y2I6 1382 aa8.3□□□□□ -1.08
EPHA4-204ENST00000415749 PRAG1Q86YV5 1406 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 MEGF11A6BM72 1044 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 RAB11FIP3O75154 756 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 SLFN14P0C7P3 912 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 COL8A1P27658 744 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 PTPROQ16827 1216 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.29□□□□□ -1.08
EPHA4-204ENST00000415749 MICAL1Q8TDZ2 1067 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 CCDC86Q9H6F5 360 aaKnown RBP8.29□□□□□ -1.08
EPHA4-204ENST00000415749 CYP4F12Q9HCS2 524 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 ROCK1Q13464 1354 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 RGPD1P0DJD0 1748 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 NWD2Q9ULI1 1742 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 TNS3Q68CZ2 1445 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
EPHA4-204ENST00000415749 SBNO1A3KN83 1393 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 ARHGEF10O15013 1369 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 WISP1O95388 367 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 ECEL1O95672 775 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 ATF4P18848 351 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-204ENST00000415749 IGBP1P78318 339 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 RASIP1Q5U651 963 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 TMEM132EQ6IEE7 984 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 KIAA1211Q6ZU35 1233 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 GOLM1Q8NBJ4 401 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 GPBAR1Q8TDU6 330 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-204ENST00000415749 TMPRSS13Q9BYE2 586 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 KCNQ5Q9NR82 932 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 CACNA2D2Q9NY47 1150 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 PCDHB5Q9Y5E4 795 aa8.28□□□□□ -1.08
EPHA4-204ENST00000415749 CDC42BPGQ6DT37 1551 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 hCG_2014768A0A024R1R8 64 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 F8W735 103 aaPredicted RBP8.27□□□□□ -1.09
EPHA4-204ENST00000415749 CLSTN1O94985 981 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 BPNT1O95861 308 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 CTSBP07858 339 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 SELPP16109 830 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 GJA8P48165 433 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 FAM160A1Q05DH4 1040 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 PAK2Q13177 524 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 SEPT6Q14141 434 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 ANKRD34AQ69YU3 496 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 FDX2Q6P4F2 183 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 MRFAP1L1Q96HT8 127 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 CEP41Q9BYV8 373 aa8.27□□□□□ -1.09
EPHA4-204ENST00000415749 AKTIPQ9H8T0 292 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms