RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 SKOR2Q2VWA4 1001 aaPredicted RBP4.55□□□□□ -1.68
LINC00428-201ENST00000415620 LETMD1Q6P1Q0 360 aa4.55□□□□□ -1.68
LINC00428-201ENST00000415620 CREG2Q8IUH2 290 aa4.55□□□□□ -1.68
LINC00428-201ENST00000415620 OXR1Q8N573 874 aa4.55□□□□□ -1.68
LINC00428-201ENST00000415620 PDZD8Q8NEN9 1154 aa4.55□□□□□ -1.68
LINC00428-201ENST00000415620 GAL3ST3Q96A11 431 aa4.55□□□□□ -1.68
LINC00428-201ENST00000415620 GLI2P10070 1586 aa4.55□□□□□ -1.68
LINC00428-201ENST00000415620 PNMA6FA0A0J9YX94 578 aa4.54□□□□□ -1.68
LINC00428-201ENST00000415620 RBAK-RBAKDNI3L0D1 243 aa4.54□□□□□ -1.68
LINC00428-201ENST00000415620 TREHO43280 583 aa4.54□□□□□ -1.68
LINC00428-201ENST00000415620 TRIM13O60858 407 aa4.54□□□□□ -1.68
LINC00428-201ENST00000415620 CST3P01034 146 aaPredicted RBP4.54□□□□□ -1.68
LINC00428-201ENST00000415620 TNK2Q07912 1038 aa4.54□□□□□ -1.68
LINC00428-201ENST00000415620 PIWIL2Q8TC59 973 aaKnown RBP4.54□□□□□ -1.68
LINC00428-201ENST00000415620 TMPRSS5Q9H3S3 457 aa4.54□□□□□ -1.68
LINC00428-201ENST00000415620 ZNF552Q9H707 407 aaPredicted RBP4.54□□□□□ -1.68
LINC00428-201ENST00000415620 CWC22Q9HCG8 908 aaKnown RBP4.54□□□□□ -1.68
LINC00428-201ENST00000415620 PRAMEF27A3QJZ7 478 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 FBXO24O75426 580 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 ADRB1P08588 477 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 NFKB2Q00653 900 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 SYTL4Q96C24 671 aaPredicted RBP4.53□□□□□ -1.68
LINC00428-201ENST00000415620 PLPPR2Q96GM1 343 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 OSBPL7Q9BZF2 842 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 XYLT2Q9H1B5 865 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 C19orf44Q9H6X5 657 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 DCTN4Q9UJW0 460 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 SNCAIPQ9Y6H5 919 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 GRIN2BQ13224 1484 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 IQSEC2Q5JU85 1478 aa4.53□□□□□ -1.68
LINC00428-201ENST00000415620 ABCC8Q09428 1581 aa4.53□□□□□ -1.69
LINC00428-201ENST00000415620 CUL7Q14999 1698 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 FITM1A5D6W6 292 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 SOWAHDA6NJG2 315 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 CELA3AP09093 270 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 PDE6BP35913 854 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 KRTAP10-2P60368 255 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 ETF1P62495 437 aaKnown RBP4.52□□□□□ -1.69
LINC00428-201ENST00000415620 GAB4Q2WGN9 574 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 PCNX4Q63HM2 1172 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 HDXQ7Z353 690 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 HID1Q8IV36 788 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 FBF1Q8TES7 1133 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 DHX38Q92620 1227 aaKnown RBP4.52□□□□□ -1.69
LINC00428-201ENST00000415620 INTS4Q96HW7 963 aaKnown RBP4.52□□□□□ -1.69
LINC00428-201ENST00000415620 TRIT1Q9H3H1 467 aaKnown RBP4.52□□□□□ -1.69
LINC00428-201ENST00000415620 GCM1Q9NP62 436 aa4.52□□□□□ -1.69
LINC00428-201ENST00000415620 YBX2Q9Y2T7 364 aaKnown RBP4.52□□□□□ -1.69
LINC00428-201ENST00000415620 CFAP43Q8NDM7 1665 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 OTOL1A6NHN0 477 aaPredicted RBP4.51□□□□□ -1.69
LINC00428-201ENST00000415620 GIPC1O14908 333 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 TPP2P29144 1249 aaPredicted RBP4.51□□□□□ -1.69
LINC00428-201ENST00000415620 PLCB3Q01970 1234 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 NR0B2Q15466 257 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 PRAMEF13Q5VWM6 474 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.51□□□□□ -1.69
LINC00428-201ENST00000415620 SPPL2CQ8IUH8 684 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 Q96M66 194 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 SGPP1Q9BX95 441 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 TACC3Q9Y6A5 838 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 PREX1Q8TCU6 1659 aa4.51□□□□□ -1.69
LINC00428-201ENST00000415620 ADAMTS20P59510 1910 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 GRIN2AQ12879 1464 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 PRG4Q92954 1404 aaPredicted RBP4.5□□□□□ -1.69
LINC00428-201ENST00000415620 WASH4PA8MWX3 477 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 GFRA2O00451 464 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 ZGLP1P0C6A0 271 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 CDK8P49336 464 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 EGR3Q06889 387 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 SNX17Q15036 470 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 ZXDCQ2QGD7 858 aaPredicted RBP4.5□□□□□ -1.69
LINC00428-201ENST00000415620 CDH24Q86UP0 819 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 XAGE3Q8WTP9 111 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 DUSP15Q9H1R2 295 aaPredicted RBP4.5□□□□□ -1.69
LINC00428-201ENST00000415620 GPATCH2Q9NW75 528 aa4.5□□□□□ -1.69
LINC00428-201ENST00000415620 NUP160Q12769 1436 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 HSPA1LP34931 641 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 ETV3P41162 512 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 FMR1Q06787 632 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00428-201ENST00000415620 SSPNQ14714 243 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 WIPI1Q5MNZ9 446 aaPredicted RBP4.49□□□□□ -1.69
LINC00428-201ENST00000415620 MRPL41Q8IXM3 137 aaKnown RBP4.49□□□□□ -1.69
LINC00428-201ENST00000415620 SIGLEC10Q96LC7 697 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 RGS17Q9UGC6 210 aaPredicted RBP4.49□□□□□ -1.69
LINC00428-201ENST00000415620 DUSP13Q9UII6 198 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 GPR160Q9UJ42 338 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 IRAK3Q9Y616 596 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 TEX14Q8IWB6 1497 aa4.49□□□□□ -1.69
LINC00428-201ENST00000415620 SOGA1O94964 1423 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 PSPNO60542 156 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 PI3P19957 117 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 GRK4P32298 578 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 AFF3P51826 1226 aaKnown RBP4.48□□□□□ -1.69
LINC00428-201ENST00000415620 CHRNEQ04844 493 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 SPATS1Q496A3 300 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 TIGD5Q53EQ6 642 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 SV2BQ7L1I2 683 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 DNAJB8Q8NHS0 232 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 DACT3Q96B18 629 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms