RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 USP17L20D6RJB6 530 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
A1CF-208ENST00000414883 PDE4AP27815 886 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 FLT3LGP49771 235 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
A1CF-208ENST00000414883 USP17L24Q0WX57 530 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 DDRGK1Q96HY6 314 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 FEZ1Q99689 392 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 RPAP3Q9H6T3 665 aaPredicted RBP13.08□□□□□ -0.32
A1CF-208ENST00000414883 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
A1CF-208ENST00000414883 MINDY4BA8MYZ0 360 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 HOXD10P28358 340 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 GRK4P32298 578 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 ERVK-24P63145 666 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 ICA1Q05084 483 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 IRF5Q13568 498 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 MTFR1Q15390 333 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 PORCNQ9H237 461 aa13.07□□□□□ -0.32
A1CF-208ENST00000414883 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
A1CF-208ENST00000414883 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
A1CF-208ENST00000414883 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
A1CF-208ENST00000414883 EN2P19622 333 aaPredicted RBP13.06□□□□□ -0.32
A1CF-208ENST00000414883 TDO2P48775 406 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
A1CF-208ENST00000414883 AMOTL1Q8IY63 956 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 STK11IPQ8N1F8 1099 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 GPRC5AQ8NFJ5 357 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 RAET1EQ8TD07 263 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 USP6NLQ92738 828 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 KANSL2Q9H9L4 492 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 BTBD7Q9P203 1132 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
A1CF-208ENST00000414883 RABGAP1Q9Y3P9 1069 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 PLIN4Q96Q06 1357 aa13.06□□□□□ -0.32
A1CF-208ENST00000414883 ADCY3O60266 1144 aa13.05□□□□□ -0.32
A1CF-208ENST00000414883 PRDM1O75626 825 aa13.05□□□□□ -0.32
A1CF-208ENST00000414883 APPP05067 770 aa13.05□□□□□ -0.32
A1CF-208ENST00000414883 ELNP15502 786 aa13.05□□□□□ -0.32
A1CF-208ENST00000414883 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
A1CF-208ENST00000414883 ALX1Q15699 326 aa13.05□□□□□ -0.32
A1CF-208ENST00000414883 GTF3C2Q8WUA4 911 aaPredicted RBP13.05□□□□□ -0.32
A1CF-208ENST00000414883 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
A1CF-208ENST00000414883 LAMA4Q16363 1823 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 ZNFX1Q9P2E3 1918 aaKnown RBP13.04□□□□□ -0.32
A1CF-208ENST00000414883 PPARAQ07869 468 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 MCMDC2Q4G0Z9 681 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 MORN1Q5T089 497 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 SLAIN1Q8ND83 568 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 PXYLP1Q8TE99 480 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 LPAR1Q92633 364 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 SHISA4Q96DD7 197 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 NACAP1Q9BZK3 213 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 NAPBQ9H115 298 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 ARHGEF10LQ9HCE6 1279 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
A1CF-208ENST00000414883 TRIM6-TRIM34B2RNG4 842 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
A1CF-208ENST00000414883 FGAP02671 866 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 FGRP09769 529 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
A1CF-208ENST00000414883 SDSP20132 328 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 COG2Q14746 738 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 MKL1Q969V6 931 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 COA7Q96BR5 231 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 CEP95Q96GE4 821 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 PAGR1Q9BTK6 254 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 MKNK2Q9HBH9 465 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 MTMR4Q9NYA4 1195 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 ADAMTS5Q9UNA0 930 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 ZNF236Q9UL36 1845 aa13.03□□□□□ -0.32
A1CF-208ENST00000414883 LAMA2P24043 3122 aaKnown RBP13.02□□□□□ -0.32
A1CF-208ENST00000414883 LAMA3Q16787 3333 aa13.02□□□□□ -0.32
A1CF-208ENST00000414883 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.33
A1CF-208ENST00000414883 IGHA2P01877 340 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 INHAP05111 366 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
A1CF-208ENST00000414883 CCL5P13501 91 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 MAPK4P31152 587 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 TRIM32Q13049 653 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 GPR142Q7Z601 462 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 NEDD1Q8NHV4 660 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 RILPL2Q969X0 211 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 UNC93B1Q9H1C4 597 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 IL25Q9H293 177 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 ZMYM6O95789 1325 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 CCDC171Q6TFL3 1326 aa13.02□□□□□ -0.33
A1CF-208ENST00000414883 NDUFB10O96000 172 aa13.01□□□□□ -0.33
A1CF-208ENST00000414883 XRCC5P13010 732 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms