RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 GPC1P35052 558 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 IRX6P78412 446 aaPredicted RBP11.74□□□□□ -0.53
HCG27-202ENST00000414008 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
HCG27-202ENST00000414008 CLN3Q13286 438 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 HDAC1Q13547 482 aaPredicted RBP11.74□□□□□ -0.53
HCG27-202ENST00000414008 EML3Q32P44 896 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 ANGEL2Q5VTE6 544 aaKnown RBP11.74□□□□□ -0.53
HCG27-202ENST00000414008 NPAS3Q8IXF0 933 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 GLMNQ92990 594 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 ZBED3Q96IU2 234 aaPredicted RBP11.74□□□□□ -0.53
HCG27-202ENST00000414008 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 GLIS2Q9BZE0 524 aaPredicted RBP11.74□□□□□ -0.53
HCG27-202ENST00000414008 ARHGEF10LQ9HCE6 1279 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 GGA3Q9NZ52 723 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 SERPINA10Q9UK55 444 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 MAST3O60307 1309 aa11.74□□□□□ -0.53
HCG27-202ENST00000414008 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
HCG27-202ENST00000414008 COL1A1P02452 1464 aaPredicted RBP11.74□□□□□ -0.53
HCG27-202ENST00000414008 LDHBP07195 334 aaKnown RBP11.73□□□□□ -0.53
HCG27-202ENST00000414008 PRDX5P30044 214 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 MCAMP43121 646 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 CRKP46108 304 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 RNF144AP50876 292 aaPredicted RBP11.73□□□□□ -0.53
HCG27-202ENST00000414008 SPTY2D1Q68D10 685 aaPredicted RBP11.73□□□□□ -0.53
HCG27-202ENST00000414008 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 USP48Q86UV5 1035 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 ADAMTSL1Q8N6G6 1762 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 RNF217Q8TC41 542 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
HCG27-202ENST00000414008 PASKQ96RG2 1323 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
HCG27-202ENST00000414008 ZNF646O15015 1829 aaPredicted RBP11.72□□□□□ -0.53
HCG27-202ENST00000414008 PITPNM2Q9BZ72 1349 aa11.72□□□□□ -0.53
HCG27-202ENST00000414008 TRAF5O00463 557 aa11.72□□□□□ -0.53
HCG27-202ENST00000414008 MYO1BO43795 1136 aa11.72□□□□□ -0.53
HCG27-202ENST00000414008 SMARCA5O60264 1052 aaPredicted RBP11.72□□□□□ -0.53
HCG27-202ENST00000414008 PI16Q6UXB8 463 aa11.72□□□□□ -0.53
HCG27-202ENST00000414008 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
HCG27-202ENST00000414008 RWDD1Q9H446 243 aaPredicted RBP11.72□□□□□ -0.53
HCG27-202ENST00000414008 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
HCG27-202ENST00000414008 FMR1Q06787 632 aaKnown RBP eCLIP11.71□□□□□ -0.53
HCG27-202ENST00000414008 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
HCG27-202ENST00000414008 HHIPL2Q6UWX4 724 aa11.71□□□□□ -0.53
HCG27-202ENST00000414008 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
HCG27-202ENST00000414008 LYSMD3Q7Z3D4 306 aa11.71□□□□□ -0.53
HCG27-202ENST00000414008 DZIP1Q86YF9 867 aaKnown RBP11.71□□□□□ -0.53
HCG27-202ENST00000414008 GCC1Q96CN9 775 aa11.71□□□□□ -0.53
HCG27-202ENST00000414008 ZDHHC15Q96MV8 337 aa11.71□□□□□ -0.53
HCG27-202ENST00000414008 RAB6BQ9NRW1 208 aa11.71□□□□□ -0.53
HCG27-202ENST00000414008 LRP2BPQ9P2M1 347 aa11.71□□□□□ -0.53
HCG27-202ENST00000414008 CLRN2A0PK11 232 aa11.7□□□□□ -0.54
HCG27-202ENST00000414008 ADM5C9JUS6 153 aa11.7□□□□□ -0.54
HCG27-202ENST00000414008 WFS1O76024 890 aa11.7□□□□□ -0.54
HCG27-202ENST00000414008 ZAP70P43403 619 aa11.7□□□□□ -0.54
HCG27-202ENST00000414008 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
HCG27-202ENST00000414008 APOBEC3FQ8IUX4 373 aaKnown RBP11.7□□□□□ -0.54
HCG27-202ENST00000414008 ESYT1Q9BSJ8 1104 aa11.7□□□□□ -0.54
HCG27-202ENST00000414008 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
HCG27-202ENST00000414008 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
HCG27-202ENST00000414008 TMEM88BA6NKF7 163 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 USP17L5A8MUK1 530 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 CYP2E1P05181 493 aaPredicted RBP11.69□□□□□ -0.54
HCG27-202ENST00000414008 MECOMQ03112 1051 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 NCOA4Q13772 614 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 APOBEC3HQ6NTF7 200 aaKnown RBP11.69□□□□□ -0.54
HCG27-202ENST00000414008 DLK2Q6UY11 383 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.69□□□□□ -0.54
HCG27-202ENST00000414008 ARID3AQ99856 593 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 ZNF408Q9H9D4 720 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 VEZTQ9HBM0 779 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 RAI14Q9P0K7 980 aa11.69□□□□□ -0.54
HCG27-202ENST00000414008 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
HCG27-202ENST00000414008 SCAF8Q9UPN6 1271 aaKnown RBP11.69□□□□□ -0.54
HCG27-202ENST00000414008 AOX1Q06278 1338 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 IGSF3O75054 1194 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 CELF2O95319 508 aaKnown RBP11.68□□□□□ -0.54
HCG27-202ENST00000414008 IGHDP01880 384 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
HCG27-202ENST00000414008 LDHCP07864 332 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 ATP5JP18859 108 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 GSTO1P78417 241 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 HTRA3P83110 453 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 PTSQ03393 145 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 NFX1Q12986 1120 aaKnown RBP11.68□□□□□ -0.54
HCG27-202ENST00000414008 CST9Q5W186 159 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 PRICKLE2Q7Z3G6 844 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 NSUN4Q96CB9 384 aaKnown RBP11.68□□□□□ -0.54
HCG27-202ENST00000414008 CDCA5Q96FF9 252 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 PIH1D3Q9NQM4 214 aaKnown RBP11.68□□□□□ -0.54
HCG27-202ENST00000414008 DAGLAQ9Y4D2 1042 aa11.68□□□□□ -0.54
HCG27-202ENST00000414008 GAKO14976 1311 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 ATP9BO43861 1147 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 TNFAIP1Q13829 316 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
HCG27-202ENST00000414008 PRAMEF18Q5VWM3 479 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms