RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 RASSF4Q9H2L5 321 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 FAM204AQ9H8W3 233 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 ATF3P18847 181 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 PMS1P54277 932 aaKnown RBP16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 CEP112Q8N8E3 955 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 ERICH2A1L162 156 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 MYBL2P10244 700 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 ERCC5P28715 1186 aaPredicted RBP16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 TTC19Q6DKK2 380 aaPredicted RBP16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 UBAC1Q9BSL1 405 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 UBXN1Q04323 297 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 TTF1Q15361 905 aaPredicted RBP16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 RASGRP4Q8TDF6 673 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 MYO6Q9UM54 1294 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 PKD1L3Q7Z443 1732 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 SOS2Q07890 1332 aaPredicted RBP16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 DYNLL1P63167 89 aaKnown RBP16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 LEKR1Q6ZMV7 388 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 PIK3AP1Q6ZUJ8 805 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 MSANTD4Q8NCY6 345 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 PIGBQ92521 554 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 RAB21Q9UL25 225 aa16.49■□□□□ 0.23
SEMA3F-202ENST00000413852 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 RCCD1A6NED2 376 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 COPB1P53618 953 aaKnown RBP16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 FILIP1LQ4L180 1135 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 LRRC31Q6UY01 552 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 NELFBQ8WX92 580 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 PSMB7Q99436 277 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 SMARCAL1Q9NZC9 954 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 LRP2BPQ9P2M1 347 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 TRPM3Q9HCF6 1732 aaPredicted RBP16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 SMCR8Q8TEV9 937 aaPredicted RBP16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 WASF1Q92558 559 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 DRC1Q96MC2 740 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 STK36Q9NRP7 1315 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 NUP188Q5SRE5 1749 aa16.48■□□□□ 0.23
SEMA3F-202ENST00000413852 TTC26A0AVF1 554 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 PPARAQ07869 468 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 DDX60Q8IY21 1712 aaKnown RBP16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 KCPQ6ZWJ8 1503 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 KCNJ18B7U540 433 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 MYO1BO43795 1136 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 CYP27A1Q02318 531 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 KCNJ12Q14500 433 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 SH3RF1Q7Z6J0 888 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 GIGYF2Q6Y7W6 1299 aaKnown RBP16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 ENAHQ8N8S7 591 aaPredicted RBP16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 TRIML1Q8N9V2 468 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 KRT23Q9C075 422 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 AATFQ9NY61 560 aaKnown RBP eCLIP16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 JAG2Q9Y219 1238 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
SEMA3F-202ENST00000413852 RNF40O75150 1001 aa16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 CYP7A1P22680 504 aa16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 KRT2P35908 639 aa16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 PRCPP42785 496 aa16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 USP5P45974 858 aa16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 AMPD2Q01433 879 aa16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 ZNF579Q8NAF0 562 aaKnown RBP16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 LACRTQ9GZZ8 138 aa16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 GNL3LQ9NVN8 582 aaKnown RBP16.46■□□□□ 0.23
SEMA3F-202ENST00000413852 SYF2O95926 243 aaKnown RBP16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 AGPAT5Q9NUQ2 364 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 ABCC12Q96J65 1359 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 PDE2AO00408 941 aaPredicted RBP16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 ERLIN1O75477 346 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 MATR3P43243 847 aaKnown RBP eCLIP16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 HERVK_113P62684 666 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 C2orf54Q08AI8 447 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 HSP90B2PQ58FF3 399 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 TCP11X2Q5H9J9 407 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 IRF2BP1Q8IU81 584 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 EHD2Q9NZN4 543 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 EPN1Q9Y6I3 576 aaPredicted RBP16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 MYH7P12883 1935 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 MACROD2A1Z1Q3 448 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 NPY5RQ15761 445 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 KANK3Q6NY19 840 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 PACS2Q86VP3 889 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 STAG1Q8WVM7 1258 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms