RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 FOXK1P85037 733 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 SEPT2Q15019 361 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 ABCB5Q2M3G0 1257 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 CERKLQ49MI3 558 aaPredicted RBP10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 ZMYM1Q5SVZ6 1142 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 B4GALNT3Q6L9W6 998 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 CTR9Q6PD62 1173 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 TBC1D2Q9BYX2 928 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 AS3MTQ9HBK9 375 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 GINM1Q9NU53 330 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 SLC45A1Q9Y2W3 748 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 PTCH2Q9Y6C5 1203 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 A0A1W2PRG0 241 aa10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 AKR1B1P15121 316 aa10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 OSBPP22059 807 aa10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 CCDC129Q6ZRS4 1044 aa10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 SIAH1Q8IUQ4 282 aa10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 FSD1Q9BTV5 496 aa10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 ASCC2Q9H1I8 757 aaPredicted RBP10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 ZNFX1Q9P2E3 1918 aaKnown RBP10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 LAMA4Q16363 1823 aa10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 BRCA2P51587 3418 aa10.26□□□□□ -0.77
HERPUD2-203ENST00000413517 USP17L10C9JJH3 530 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 ZFYP08048 801 aaPredicted RBP10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 PSMC4P43686 418 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 CDK8P49336 464 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 RGS19P49795 217 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 NUCB1Q02818 461 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 RAB3GAP1Q15042 981 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 KIAA1755Q5JYT7 1200 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 C16orf86Q6ZW13 317 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 CHD1LQ86WJ1 897 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 ANKRD13CQ8N6S4 541 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 TMC2Q8TDI7 906 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 C12orf42Q96LP6 360 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 RWDD1Q9H446 243 aaPredicted RBP10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 ROBO3Q96MS0 1386 aa10.25□□□□□ -0.77
HERPUD2-203ENST00000413517 MKI67P46013 3256 aaKnown RBP10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 A0A0D9SFI3 127 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 C19orf81C9J6K1 198 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 HOXA7P31268 230 aaPredicted RBP10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 SBK1Q52WX2 424 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 SMCR8Q8TEV9 937 aaPredicted RBP10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 ARMC5Q96C12 935 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 P2RX7Q99572 595 aaKnown RBP10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 KIAA1683Q9H0B3 1180 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 TXNRD2Q9NNW7 524 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 SWAP70Q9UH65 585 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 GABRQQ9UN88 632 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 TACC3Q9Y6A5 838 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 CEP290O15078 2479 aa10.24□□□□□ -0.77
HERPUD2-203ENST00000413517 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 MPHOSPH10O00566 681 aaKnown RBP10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 VCAM1P19320 739 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 RASA1P20936 1047 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 HERVK_113P62684 666 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 PRKCZQ05513 592 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 FAM110CQ1W6H9 321 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 VPS53Q5VIR6 699 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 GIMAP6Q6P9H5 292 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 USP17L2Q6R6M4 530 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 IFNL3Q8IZI9 196 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 STK11IPQ8N1F8 1099 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 SH3TC2Q8TF17 1288 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 EVI5LQ96CN4 794 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 POM121Q96HA1 1249 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 FAM227BQ96M60 508 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 FEZ1Q99689 392 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 CABP5Q9NP86 173 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 TMOD4Q9NZQ9 345 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 ARPP21Q9UBL0 812 aaPredicted RBP10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 SRRDQ9UH36 339 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 PNMA3Q9UL41 463 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 SMCHD1A6NHR9 2005 aa10.23□□□□□ -0.77
HERPUD2-203ENST00000413517 MINDY4BA8MYZ0 360 aa10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 IRX3P78415 501 aaPredicted RBP10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 KIF22Q14807 665 aa10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 TMEM179Q6ZVK1 233 aa10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 ZNF589Q86UQ0 364 aaPredicted RBP10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 ZNF333Q96JL9 665 aa10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 OSBPL3Q9H4L5 887 aa10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 RBPJLQ9UBG7 517 aa10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 MORF4L1Q9UBU8 362 aa10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 MYPNQ86TC9 1320 aa10.22□□□□□ -0.77
HERPUD2-203ENST00000413517 FRMPD3Q5JV73 1810 aa10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 PATL2C9JE40 543 aaKnown RBP10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 CNMDO75829 334 aa10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 GNRH1P01148 92 aa10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 GCLCP48506 637 aaPredicted RBP10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 TDO2P48775 406 aa10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 FCGRTP55899 365 aa10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 ICA1Q05084 483 aa10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 NMIQ13287 307 aaPredicted RBP10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 PABPC4Q13310 644 aaKnown RBP eCLIP10.21□□□□□ -0.77
HERPUD2-203ENST00000413517 SKIV2LQ15477 1246 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms