RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 SLC30A3Q99726 388 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 EHMT1Q9H9B1 1298 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 STRN4Q9NRL3 753 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 SLC12A7Q9Y666 1083 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 TET3O43151 1660 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 J3QW42 95 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 GNB5O14775 395 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 B3GALT4O96024 378 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 VIL1P09327 827 aaKnown RBP7.55□□□□□ -1.2
NOD1-203ENST00000413433 EIF2AK2P19525 551 aaKnown RBP7.55□□□□□ -1.2
NOD1-203ENST00000413433 GUCY2CP25092 1073 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 ARNTP27540 789 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 TBC1D8BQ0IIM8 1120 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 PCSK7Q16549 785 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 DALRD3Q5D0E6 543 aaKnown RBP7.55□□□□□ -1.2
NOD1-203ENST00000413433 TMEM67Q5HYA8 995 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 LCE3BQ5TA77 95 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 MEX3CQ5U5Q3 659 aaKnown RBP7.55□□□□□ -1.2
NOD1-203ENST00000413433 CEP135Q66GS9 1140 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 LINC00114Q6XXX2 140 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 KRT26Q7Z3Y9 468 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 TTC6Q86TZ1 520 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 CD163Q86VB7 1156 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 FMNL3Q8IVF7 1028 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 TM9SF2Q99805 663 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 SEMA6BQ9H3T3 888 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 MYH16Q9H6N6 1097 aa7.55□□□□□ -1.2
NOD1-203ENST00000413433 LMTK2Q8IWU2 1503 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 CCDC194A0A1B0GVG4 234 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 A0A1W2PQH9 124 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 ATF3P18847 181 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 CD33P20138 364 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 AMPD1P23109 780 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 ITGB7P26010 798 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 GORABQ5T7V8 394 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.54□□□□□ -1.2
NOD1-203ENST00000413433 CHAC2Q8WUX2 184 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 MFSD3Q96ES6 412 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 TCEAL9Q9UHQ7 104 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 PLEKHG1Q9ULL1 1385 aa7.54□□□□□ -1.2
NOD1-203ENST00000413433 XIRP1Q702N8 1843 aaKnown RBP7.54□□□□□ -1.2
NOD1-203ENST00000413433 ZFYVE9O95405 1425 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 TPD52L2O43399 206 aaKnown RBP7.53□□□□□ -1.2
NOD1-203ENST00000413433 ATE1O95260 518 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 PTPRAP18433 802 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 C21orf62-AS1Q17RA5 79 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 SCARA3Q6AZY7 606 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 CCAR1Q8IX12 1150 aaKnown RBP7.53□□□□□ -1.2
NOD1-203ENST00000413433 GRIN3AQ8TCU5 1115 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 DDX17Q92841 729 aaKnown RBP7.53□□□□□ -1.2
NOD1-203ENST00000413433 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 POP1Q99575 1024 aaKnown RBP7.53□□□□□ -1.2
NOD1-203ENST00000413433 UBE2OQ9C0C9 1292 aaKnown RBP7.53□□□□□ -1.2
NOD1-203ENST00000413433 C19orf44Q9H6X5 657 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 NOP53Q9NZM5 478 aaKnown RBP7.53□□□□□ -1.2
NOD1-203ENST00000413433 HCN2Q9UL51 889 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 POLR3KQ9Y2Y1 108 aaPredicted RBP7.53□□□□□ -1.2
NOD1-203ENST00000413433 RIPOR2Q9Y4F9 1068 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 NUP155O75694 1391 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 ROBO1Q9Y6N7 1651 aa7.53□□□□□ -1.2
NOD1-203ENST00000413433 CROCC2H7BZ55 1655 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 JCADQ9P266 1359 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 IQCA1LA6NCM1 817 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 BNIP3LO60238 219 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 MYCLP1P12525 358 aaPredicted RBP7.52□□□□□ -1.21
NOD1-203ENST00000413433 NCAPHQ15003 741 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 HGSNATQ68CP4 663 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 MRM1Q6IN84 353 aaKnown RBP7.52□□□□□ -1.21
NOD1-203ENST00000413433 VHLLQ6RSH7 139 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 NIM1KQ8IY84 436 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 LRRC47Q8N1G4 583 aaKnown RBP7.52□□□□□ -1.21
NOD1-203ENST00000413433 STK35Q8TDR2 534 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 TMEM40Q8WWA1 233 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 ACSBG1Q96GR2 724 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 IER2Q9BTL4 223 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.21
NOD1-203ENST00000413433 ATP8A1Q9Y2Q0 1164 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 ADGRB3O60242 1522 aa7.52□□□□□ -1.21
NOD1-203ENST00000413433 ADGRL2O95490 1459 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 IRS4O14654 1257 aaPredicted RBP7.51□□□□□ -1.21
NOD1-203ENST00000413433 MAP4K4O95819 1239 aaPredicted RBP7.51□□□□□ -1.21
NOD1-203ENST00000413433 HOXB4P17483 251 aaPredicted RBP7.51□□□□□ -1.21
NOD1-203ENST00000413433 SOX5P35711 763 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 CHRNA4P43681 627 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 MAP1SQ66K74 1059 aaPredicted RBP7.51□□□□□ -1.21
NOD1-203ENST00000413433 SLCO4C1Q6ZQN7 724 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 BRINP3Q76B58 766 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 CCDC146Q8IYE0 955 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 NINJ1Q92982 152 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 SGSM3Q96HU1 749 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 KRTAP4-12Q9BQ66 201 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 SPATA9Q9BWV2 254 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 ANTXR1Q9H6X2 564 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 MCM8Q9UJA3 840 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 ADAMTS13Q76LX8 1427 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 PTPRUQ92729 1446 aa7.51□□□□□ -1.21
NOD1-203ENST00000413433 NKTRP30414 1462 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms