RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PITPNM2Q9BZ72 1349 aa7.74□□□□□ -1.17
VPS41-204ENST00000413141 SCN4AP35499 1836 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 DOCK1Q14185 1865 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 GH2P01242 217 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 KIF5BP33176 963 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 GUCY1A2P33402 732 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 FOSBP53539 338 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 JAG1P78504 1218 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 MAP3K10Q02779 954 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 ICA1Q05084 483 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 SSRP1Q08945 709 aaKnown RBP7.73□□□□□ -1.17
VPS41-204ENST00000413141 SEPT2Q15019 361 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 NFKBIBQ15653 356 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 FOXD4L5Q5VV16 416 aaPredicted RBP7.73□□□□□ -1.17
VPS41-204ENST00000413141 DPY19L2Q6NUT2 758 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 TRIM22Q8IYM9 498 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 CMTR1Q8N1G2 835 aaKnown RBP7.73□□□□□ -1.17
VPS41-204ENST00000413141 FOXD4L4Q8WXT5 416 aaPredicted RBP7.73□□□□□ -1.17
VPS41-204ENST00000413141 GBP4Q96PP9 640 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 SLC26A6Q9BXS9 759 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 RNF26Q9BY78 433 aaPredicted RBP7.73□□□□□ -1.17
VPS41-204ENST00000413141 DEFB129Q9H1M3 183 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 MAD2L2Q9UI95 211 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 MYH15Q9Y2K3 1946 aa7.73□□□□□ -1.17
VPS41-204ENST00000413141 PALM3A6NDB9 673 aaPredicted RBP7.72□□□□□ -1.17
VPS41-204ENST00000413141 GLTPD2A6NH11 291 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 UBE2Q2LH0YL09 131 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 H3BQV1 296 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 DEXIO95424 95 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 BAG4O95429 457 aaKnown RBP7.72□□□□□ -1.17
VPS41-204ENST00000413141 SNHG28P0DPA3 235 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 PDHBP11177 359 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 EEF2P13639 858 aaKnown RBP7.72□□□□□ -1.17
VPS41-204ENST00000413141 RESTQ13127 1097 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 IFFO2Q5TF58 517 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 MIGA2Q7L4E1 593 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 STAG2Q8N3U4 1231 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 SRBD1Q8N5C6 995 aaKnown RBP7.72□□□□□ -1.17
VPS41-204ENST00000413141 RGS22Q8NE09 1264 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 WASF1Q92558 559 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 C8orf76Q96K31 380 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 AIFM3Q96NN9 605 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 ALG1Q9BT22 464 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 CABP5Q9NP86 173 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 NYAP2Q9P242 653 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 CLIP2Q9UDT6 1046 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 ZBTB21Q9ULJ3 1066 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 SYNPO2Q9UMS6 1093 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 MYH6P13533 1939 aa7.72□□□□□ -1.17
VPS41-204ENST00000413141 OTOFQ9HC10 1997 aa7.71□□□□□ -1.17
VPS41-204ENST00000413141 USP17L5A8MUK1 530 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 PHF20L1A8MW92 1017 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 PRPF3O43395 683 aaKnown RBP7.71□□□□□ -1.18
VPS41-204ENST00000413141 PARP1P09874 1014 aaKnown RBP7.71□□□□□ -1.18
VPS41-204ENST00000413141 GOLGA8HP0CJ92 632 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 MCM4P33991 863 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 EPHX2P34913 555 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 CAP2P40123 477 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 GNAQP50148 359 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 ATP2B2Q01814 1243 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 MKRN4PQ13434 485 aaPredicted RBP7.71□□□□□ -1.18
VPS41-204ENST00000413141 PKN1Q16512 942 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 SLC35G1Q2M3R5 365 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 ASPRV1Q53RT3 343 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 NBPF12Q5TAG4 269 aaPredicted RBP7.71□□□□□ -1.18
VPS41-204ENST00000413141 DCAF15Q66K64 600 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 USP17L2Q6R6M4 530 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 USP50Q70EL3 339 aaPredicted RBP7.71□□□□□ -1.18
VPS41-204ENST00000413141 FERMT3Q86UX7 667 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 SIAH1Q8IUQ4 282 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 CCDC82Q8N4S0 544 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 GMCL1P1Q8NEA9 526 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 FBXO18Q8NFZ0 1043 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 MKL1Q969V6 931 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 HOOK2Q96ED9 719 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 CHAMP1Q96JM3 812 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 LZTS2Q9BRK4 669 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 SPZ1Q9BXG8 430 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 RBM27Q9P2N5 1060 aaKnown RBP7.71□□□□□ -1.18
VPS41-204ENST00000413141 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.71□□□□□ -1.18
VPS41-204ENST00000413141 MTMR7Q9Y216 660 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 ATP6V1DQ9Y5K8 247 aa7.71□□□□□ -1.18
VPS41-204ENST00000413141 FRMPD2Q68DX3 1309 aaPredicted RBP7.71□□□□□ -1.18
VPS41-204ENST00000413141 A0A1W2PRG0 241 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 IQCA1LA6NCM1 817 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 DDX11L8A8MPP1 907 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 ADM5C9JUS6 153 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 KLRF2D3W0D1 207 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 CYTH3O43739 400 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 ASNSP08243 561 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 AKAP17AQ02040 695 aaKnown RBP7.7□□□□□ -1.18
VPS41-204ENST00000413141 GUCY1B3Q02153 619 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 ZNF543Q08ER8 600 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 PFKFB3Q16875 520 aaPredicted RBP7.7□□□□□ -1.18
VPS41-204ENST00000413141 GPATCH4Q5T3I0 446 aaKnown RBP7.7□□□□□ -1.18
VPS41-204ENST00000413141 KRT40Q6A162 431 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 OTUD7BQ6GQQ9 843 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 DCAF4Q8WV16 495 aa7.7□□□□□ -1.18
VPS41-204ENST00000413141 SHISA4Q96DD7 197 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms