RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 TYW1BQ6NUM6 668 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 USP17L2Q6R6M4 530 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 LRSAM1Q6UWE0 723 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 METTL16Q86W50 562 aaKnown RBP9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 FOXP4Q8IVH2 680 aaPredicted RBP9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 CCAR1Q8IX12 1150 aaKnown RBP9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 DIS3L2Q8IYB7 885 aaKnown RBP9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 TRIM22Q8IYM9 498 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 WASF1Q92558 559 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 FUCA2Q9BTY2 467 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 EHD4Q9H223 541 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 POLR3EQ9NVU0 708 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 STX8Q9UNK0 236 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 MTMR7Q9Y216 660 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 BCS1LQ9Y276 419 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 CNTNAP1P78357 1384 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 LAMB1P07942 1786 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 CLRN2A0PK11 232 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 TCP10L2B9ZVM9 353 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 ENTPD3O75355 529 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 EIF6P56537 245 aaKnown RBP9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 RASSF7Q02833 373 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 SF3A1Q15459 793 aaKnown RBP9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 CAMK4Q16566 473 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 PFKFB3Q16875 520 aaPredicted RBP9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 CCDC183Q5T5S1 534 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 TATDN1Q6P1N9 297 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 NOSTRINQ8IVI9 506 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 NIM1KQ8IY84 436 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 CTCFLQ8NI51 663 aaPredicted RBP9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 UBA5Q9GZZ9 404 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 FOXP1Q9H334 677 aaPredicted RBP9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 DACT1Q9NYF0 836 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 NAV1Q8NEY1 1877 aa9.98□□□□□ -0.81
HMGN1P34-201ENST00000413023 KLRF2D3W0D1 207 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 SPTLC2O15270 562 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 YEATS4O95619 227 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 EGFRP00533 1210 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 SCG2P13521 617 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 MARCKSP29966 332 aaPredicted RBP9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 MRE11P49959 708 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 NBPF9Q3BBW0 867 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 SOGA3Q5TF21 947 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 ADALQ6DHV7 355 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 TTBK2Q6IQ55 1244 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 LRRC47Q8N1G4 583 aaKnown RBP9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 MTMR14Q8NCE2 650 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 AGBL3Q8NEM8 1001 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 GPKOWQ92917 476 aaPredicted RBP eCLIP9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 TAOK3Q9H2K8 898 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 DHX36Q9H2U1 1008 aaKnown RBP9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 CABP5Q9NP86 173 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 PI4KBQ9UBF8 816 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 SWAP70Q9UH65 585 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 SCAF8Q9UPN6 1271 aaKnown RBP9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 PCDHB6Q9Y5E3 794 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 MRVI1Q9Y6F6 885 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 PLIN4Q96Q06 1357 aa9.97□□□□□ -0.81
HMGN1P34-201ENST00000413023 A0A1B0GVL5 298 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 SNHG28P0DPA3 235 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 PDHBP11177 359 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 KIF5BP33176 963 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 GRIN1Q05586 938 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 TRIM29Q14134 588 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 DLGAP5Q15398 846 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 WWC2Q6AWC2 1192 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 CIAPIN1Q6FI81 312 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 MKL1Q969V6 931 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 CLIC6Q96NY7 704 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 VAT1LQ9HCJ6 419 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 ASTN2O75129 1339 aaPredicted RBP9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 ATRNL1Q5VV63 1379 aa9.96□□□□□ -0.82
HMGN1P34-201ENST00000413023 A0A1W2PQ27 194 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 A0A1W2PQ64 194 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 A0A1W2PQD8 194 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 M0R2N6 131 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 STXBP3O00186 592 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 EDIL3O43854 480 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 HLA-DOAP06340 250 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 PARP1P09874 1014 aaKnown RBP9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 EEF2P13639 858 aaKnown RBP9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 ATP2B1P20020 1258 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 ME1P48163 572 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 GNAQP50148 359 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 ZNF280AP59817 542 aaPredicted RBP9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 AKAP17AQ02040 695 aaKnown RBP9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 SEPT2Q15019 361 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 STK38Q15208 465 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 SHC4Q6S5L8 630 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 RBM43Q6ZSC3 357 aaKnown RBP9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 ZSCAN29Q8IWY8 852 aaPredicted RBP9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 FMR1NBQ8N0W7 255 aaPredicted RBP9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 FSIP1Q8NA03 581 aa9.95□□□□□ -0.82
HMGN1P34-201ENST00000413023 BICD2Q8TD16 824 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms