RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 JAKMIP3Q5VZ66 844 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 C16orf86Q6ZW13 317 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 CNKSR2Q8WXI2 1034 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 FBXO28Q9NVF7 368 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-203ENST00000412570 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
SMPD4-203ENST00000412570 GPT2Q8TD30 523 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 EPB41L2O43491 1005 aaKnown RBP11.24□□□□□ -0.61
SMPD4-203ENST00000412570 CDC25AP30304 524 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 ZNF174Q15697 407 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-203ENST00000412570 PIK3AP1Q6ZUJ8 805 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 GJA10Q969M2 543 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 CLIC6Q96NY7 704 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 TMEM232C9JQI7 657 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-203ENST00000412570 KRT85P78386 507 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMPD4-203ENST00000412570 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-203ENST00000412570 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 HMGN5P82970 282 aaKnown RBP11.23□□□□□ -0.61
SMPD4-203ENST00000412570 SAFBQ15424 915 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMPD4-203ENST00000412570 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
SMPD4-203ENST00000412570 WRNIP1Q96S55 665 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 LMBRD1Q9NUN5 540 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 LIFRP42702 1097 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 NAPAP54920 295 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 SBK1Q52WX2 424 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 ZNF341Q9BYN7 854 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 MTMR4Q9NYA4 1195 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 KIF3AQ9Y496 699 aa11.23□□□□□ -0.61
SMPD4-203ENST00000412570 A0A1B0GVL5 298 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 A0A1W2PRG0 241 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 CDKL5O76039 1030 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 UBE2SQ16763 222 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 GIMAP6Q6P9H5 292 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 RBAK-RBAKDNI3L0D1 243 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 SORBS3O60504 671 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 MCM7P33993 719 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 NTRK3Q16288 839 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 SLC30A10Q6XR72 485 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 FBXO18Q8NFZ0 1043 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 TMEM260Q9NX78 707 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 TRAF5O00463 557 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 CYTH3O43739 400 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 DHX8Q14562 1220 aaKnown RBP11.22□□□□□ -0.61
SMPD4-203ENST00000412570 FAM83BQ5T0W9 1011 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 FAM163AQ96GL9 167 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-203ENST00000412570 TANGO6Q9C0B7 1094 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 PKD2L1Q9P0L9 805 aa11.22□□□□□ -0.61
SMPD4-203ENST00000412570 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 ORC4O43929 436 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 LIG1P18858 919 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 SPP2Q13103 211 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 TYW1BQ6NUM6 668 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 TMTC2Q8N394 836 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 STAMQ92783 540 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 SEC63Q9UGP8 760 aaKnown RBP11.21□□□□□ -0.61
SMPD4-203ENST00000412570 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.61
SMPD4-203ENST00000412570 TTLL1O95922 423 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 PLS1Q14651 629 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 SLC35G1Q2M3R5 365 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 SGMS1Q86VZ5 419 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 RASSF8Q8NHQ8 419 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 NEDD1Q8NHV4 660 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 GMLQ99445 158 aa11.21□□□□□ -0.61
SMPD4-203ENST00000412570 BRCA2P51587 3418 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 F5H6K3 240 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 BIN1O00499 593 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 WNT7AO00755 349 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 HOXA13P31271 388 aaPredicted RBP11.21□□□□□ -0.62
SMPD4-203ENST00000412570 KLRC3Q07444 240 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 KRT26Q7Z3Y9 468 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 SMARCC2Q8TAQ2 1214 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 SHISA4Q96DD7 197 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 AGXT2Q9BYV1 514 aa11.21□□□□□ -0.62
SMPD4-203ENST00000412570 KIF5BP33176 963 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 TNNI2P48788 182 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 SPDYE2Q495Y8 402 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 TMTC3Q6ZXV5 915 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 TMEM63CQ9P1W3 806 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 TOP1P11387 765 aaKnown RBP11.2□□□□□ -0.62
SMPD4-203ENST00000412570 GRIN1Q05586 938 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 RESTQ13127 1097 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 KIAA1755Q5JYT7 1200 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 ZHX2Q9Y6X8 837 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 TCHHQ07283 1943 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L15C9J2P7 530 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L13C9JLJ4 530 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L11C9JVI0 530 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L18D6R9N7 530 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms