RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 RAET1EQ8TD07 263 aa22.44■■□□□ 1.18
TRIM56-202ENST00000412507 SH3TC2Q8TF17 1288 aa22.44■■□□□ 1.18
TRIM56-202ENST00000412507 PAGR1Q9BTK6 254 aa22.44■■□□□ 1.18
TRIM56-202ENST00000412507 ZNF287Q9HBT7 754 aa22.44■■□□□ 1.18
TRIM56-202ENST00000412507 ZNFX1Q9P2E3 1918 aaKnown RBP22.44■■□□□ 1.18
TRIM56-202ENST00000412507 SLC3A2P08195 630 aaKnown RBP22.43■■□□□ 1.18
TRIM56-202ENST00000412507 CTDSPL2Q05D32 466 aa22.43■■□□□ 1.18
TRIM56-202ENST00000412507 PDE4BQ07343 736 aa22.43■■□□□ 1.18
TRIM56-202ENST00000412507 TTC22Q5TAA0 569 aa22.43■■□□□ 1.18
TRIM56-202ENST00000412507 SPICE1Q8N0Z3 855 aa22.43■■□□□ 1.18
TRIM56-202ENST00000412507 GPRC5AQ8NFJ5 357 aa22.43■■□□□ 1.18
TRIM56-202ENST00000412507 GTF3C2Q8WUA4 911 aaPredicted RBP22.43■■□□□ 1.18
TRIM56-202ENST00000412507 VCPKMTQ9H867 229 aa22.43■■□□□ 1.18
TRIM56-202ENST00000412507 DIAPH3Q9NSV4 1193 aa22.43■■□□□ 1.18
TRIM56-202ENST00000412507 HSPD1P10809 573 aaKnown RBP22.42■■□□□ 1.18
TRIM56-202ENST00000412507 GSPT1P15170 499 aaKnown RBP22.42■■□□□ 1.18
TRIM56-202ENST00000412507 RGS19P49795 217 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 ERVK-9P63128 1117 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 ERVK-24P63145 666 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 ALX1Q15699 326 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 Q3C1V9 767 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 CWC27Q6UX04 472 aaKnown RBP22.42■■□□□ 1.18
TRIM56-202ENST00000412507 NBPF11Q86T75 865 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 COA7Q96BR5 231 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 ZNF333Q96JL9 665 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 TANGO6Q9C0B7 1094 aa22.42■■□□□ 1.18
TRIM56-202ENST00000412507 FGAP02671 866 aa22.41■■□□□ 1.18
TRIM56-202ENST00000412507 FLT3LGP49771 235 aa22.41■■□□□ 1.18
TRIM56-202ENST00000412507 LPAR1Q92633 364 aa22.41■■□□□ 1.18
TRIM56-202ENST00000412507 INCENPQ9NQS7 918 aa22.41■■□□□ 1.18
TRIM56-202ENST00000412507 IGKV6D-41A0A0C4DH26 115 aa22.4■■□□□ 1.18
TRIM56-202ENST00000412507 SPDYE16A6NNV3 312 aaPredicted RBP22.4■■□□□ 1.18
TRIM56-202ENST00000412507 HIP1O00291 1037 aa22.4■■□□□ 1.18
TRIM56-202ENST00000412507 CNMDO75829 334 aa22.4■■□□□ 1.18
TRIM56-202ENST00000412507 FAM47AQ5JRC9 791 aa22.4■■□□□ 1.18
TRIM56-202ENST00000412507 NYAP2Q9P242 653 aa22.4■■□□□ 1.18
TRIM56-202ENST00000412507 RABGAP1Q9Y3P9 1069 aa22.4■■□□□ 1.18
TRIM56-202ENST00000412507 TACC3Q9Y6A5 838 aa22.4■■□□□ 1.18
TRIM56-202ENST00000412507 RAD21O60216 631 aa22.39■■□□□ 1.17
TRIM56-202ENST00000412507 MYCP01106 439 aaPredicted RBP22.39■■□□□ 1.17
TRIM56-202ENST00000412507 GRK4P32298 578 aa22.39■■□□□ 1.17
TRIM56-202ENST00000412507 MFAP1P55081 439 aaKnown RBP22.39■■□□□ 1.17
TRIM56-202ENST00000412507 COG2Q14746 738 aa22.39■■□□□ 1.17
TRIM56-202ENST00000412507 GOPCQ9HD26 462 aa22.39■■□□□ 1.17
TRIM56-202ENST00000412507 ANAPC4Q9UJX5 808 aa22.39■■□□□ 1.17
TRIM56-202ENST00000412507 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.39■■□□□ 1.17
TRIM56-202ENST00000412507 TNRC18O15417 2968 aaPredicted RBP22.38■■□□□ 1.17
TRIM56-202ENST00000412507 WDR46O15213 610 aaKnown RBP22.38■■□□□ 1.17
TRIM56-202ENST00000412507 TSPY3P0CV98 308 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 TSPY8P0CW00 308 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 TFAP4Q01664 338 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 LBX2Q6XYB7 198 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 NEDD1Q8NHV4 660 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 CEP95Q96GE4 821 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 PORCNQ9H237 461 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 BTBD7Q9P203 1132 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 CLIP2Q9UDT6 1046 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 PLIN4Q96Q06 1357 aa22.38■■□□□ 1.17
TRIM56-202ENST00000412507 ZMYM6O95789 1325 aa22.37■■□□□ 1.17
TRIM56-202ENST00000412507 ADCY3O60266 1144 aa22.37■■□□□ 1.17
TRIM56-202ENST00000412507 MTMR4Q9NYA4 1195 aa22.37■■□□□ 1.17
TRIM56-202ENST00000412507 HOXC10Q9NYD6 342 aa22.37■■□□□ 1.17
TRIM56-202ENST00000412507 POTEFA5A3E0 1075 aa22.36■■□□□ 1.17
TRIM56-202ENST00000412507 FLOT1O75955 427 aa22.36■■□□□ 1.17
TRIM56-202ENST00000412507 ELNP15502 786 aa22.36■■□□□ 1.17
TRIM56-202ENST00000412507 DSG3P32926 999 aa22.36■■□□□ 1.17
TRIM56-202ENST00000412507 MLLT1Q03111 559 aaPredicted RBP22.36■■□□□ 1.17
TRIM56-202ENST00000412507 IRF5Q13568 498 aa22.36■■□□□ 1.17
TRIM56-202ENST00000412507 SAMD1Q6SPF0 538 aaPredicted RBP22.36■■□□□ 1.17
TRIM56-202ENST00000412507 CCAR1Q8IX12 1150 aaKnown RBP22.36■■□□□ 1.17
TRIM56-202ENST00000412507 BIN2Q9UBW5 565 aaPredicted RBP22.36■■□□□ 1.17
TRIM56-202ENST00000412507 GJD2Q9UKL4 321 aa22.36■■□□□ 1.17
TRIM56-202ENST00000412507 MAPK4P31152 587 aa22.35■■□□□ 1.17
TRIM56-202ENST00000412507 HAND2P61296 217 aa22.35■■□□□ 1.17
TRIM56-202ENST00000412507 FAM83BQ5T0W9 1011 aa22.35■■□□□ 1.17
TRIM56-202ENST00000412507 SLAIN1Q8ND83 568 aa22.35■■□□□ 1.17
TRIM56-202ENST00000412507 TMEM106CQ9BVX2 250 aa22.35■■□□□ 1.17
TRIM56-202ENST00000412507 PDE4DIPQ5VU43 2346 aa22.35■■□□□ 1.17
TRIM56-202ENST00000412507 TSPY2A6NKD2 308 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 F5H6K3 240 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 RANBP6O60518 1105 aaKnown RBP22.34■■□□□ 1.17
TRIM56-202ENST00000412507 TTLL1O95922 423 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 CCNA1P78396 465 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 KLRC3Q07444 240 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 MTFR1Q15390 333 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 GPR142Q7Z601 462 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 PXYLP1Q8TE99 480 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 MKL1Q969V6 931 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 ATG4CQ96DT6 458 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 NUP88Q99567 741 aaPredicted RBP22.34■■□□□ 1.17
TRIM56-202ENST00000412507 TOMM22Q9NS69 142 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 FBXO28Q9NVF7 368 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 PLXNA1Q9UIW2 1896 aa22.34■■□□□ 1.17
TRIM56-202ENST00000412507 ORC4O43929 436 aa22.33■■□□□ 1.17
TRIM56-202ENST00000412507 NDUFB10O96000 172 aa22.33■■□□□ 1.17
TRIM56-202ENST00000412507 FGRP09769 529 aa22.33■■□□□ 1.17
TRIM56-202ENST00000412507 RRP12Q5JTH9 1297 aaKnown RBP22.33■■□□□ 1.17
TRIM56-202ENST00000412507 CENPQQ7L2Z9 268 aaPredicted RBP22.33■■□□□ 1.17
TRIM56-202ENST00000412507 PLEKHH3Q7Z736 793 aa22.33■■□□□ 1.17
TRIM56-202ENST00000412507 LRRC47Q8N1G4 583 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms