RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 VCPKMTQ9H867 229 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 EEF2P13639 858 aaKnown RBP20.76■□□□□ 0.91
HSPG2-204ENST00000412328 SLC9C1Q4G0N8 1177 aa20.76■□□□□ 0.91
HSPG2-204ENST00000412328 GTF3C2Q8WUA4 911 aaPredicted RBP20.76■□□□□ 0.91
HSPG2-204ENST00000412328 NAPBQ9H115 298 aa20.76■□□□□ 0.91
HSPG2-204ENST00000412328 CCDC171Q6TFL3 1326 aa20.76■□□□□ 0.91
HSPG2-204ENST00000412328 ALPK3Q96L96 1907 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 POTEFA5A3E0 1075 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 TRIM6-TRIM34B2RNG4 842 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 TNPO2O14787 897 aaKnown RBP20.75■□□□□ 0.91
HSPG2-204ENST00000412328 PRDM1O75626 825 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 APPP05067 770 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 SDSP20132 328 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 ERVK-9P63128 1117 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 ERVK-24P63145 666 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 IRF5Q13568 498 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 ALX1Q15699 326 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 Q3C1V9 767 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 MCMDC2Q4G0Z9 681 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 STK11IPQ8N1F8 1099 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 LPAR1Q92633 364 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 NACAP1Q9BZK3 213 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 KANSL2Q9H9L4 492 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 ARHGEF10LQ9HCE6 1279 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
HSPG2-204ENST00000412328 FLT3LGP49771 235 aa20.74■□□□□ 0.91
HSPG2-204ENST00000412328 TTC22Q5TAA0 569 aa20.74■□□□□ 0.91
HSPG2-204ENST00000412328 RILPL2Q969X0 211 aa20.74■□□□□ 0.91
HSPG2-204ENST00000412328 NBPF3Q9H094 633 aa20.74■□□□□ 0.91
HSPG2-204ENST00000412328 PORCNQ9H237 461 aa20.74■□□□□ 0.91
HSPG2-204ENST00000412328 IL25Q9H293 177 aa20.74■□□□□ 0.91
HSPG2-204ENST00000412328 BTBD7Q9P203 1132 aa20.74■□□□□ 0.91
HSPG2-204ENST00000412328 GJD2Q9UKL4 321 aa20.74■□□□□ 0.91
HSPG2-204ENST00000412328 FGRP09769 529 aa20.73■□□□□ 0.91
HSPG2-204ENST00000412328 HSPD1P10809 573 aaKnown RBP20.73■□□□□ 0.91
HSPG2-204ENST00000412328 HOXD10P28358 340 aa20.73■□□□□ 0.91
HSPG2-204ENST00000412328 RABGAP1Q9Y3P9 1069 aa20.73■□□□□ 0.91
HSPG2-204ENST00000412328 WDR46O15213 610 aaKnown RBP20.72■□□□□ 0.91
HSPG2-204ENST00000412328 GRK4P32298 578 aa20.72■□□□□ 0.91
HSPG2-204ENST00000412328 SPICE1Q8N0Z3 855 aa20.72■□□□□ 0.91
HSPG2-204ENST00000412328 GPRC5AQ8NFJ5 357 aa20.72■□□□□ 0.91
HSPG2-204ENST00000412328 RAET1EQ8TD07 263 aa20.72■□□□□ 0.91
HSPG2-204ENST00000412328 SH2D4AQ9H788 454 aa20.72■□□□□ 0.91
HSPG2-204ENST00000412328 NYAP2Q9P242 653 aa20.72■□□□□ 0.91
HSPG2-204ENST00000412328 LCTP09848 1927 aa20.72■□□□□ 0.91
HSPG2-204ENST00000412328 CTDSPL2Q05D32 466 aa20.71■□□□□ 0.91
HSPG2-204ENST00000412328 SLAIN1Q8ND83 568 aa20.71■□□□□ 0.91
HSPG2-204ENST00000412328 NEDD1Q8NHV4 660 aa20.71■□□□□ 0.91
HSPG2-204ENST00000412328 PXYLP1Q8TE99 480 aa20.71■□□□□ 0.91
HSPG2-204ENST00000412328 USP6NLQ92738 828 aa20.71■□□□□ 0.91
HSPG2-204ENST00000412328 CEP95Q96GE4 821 aa20.71■□□□□ 0.91
HSPG2-204ENST00000412328 PAGR1Q9BTK6 254 aa20.71■□□□□ 0.91
HSPG2-204ENST00000412328 MKNK2Q9HBH9 465 aa20.71■□□□□ 0.91
HSPG2-204ENST00000412328 SMCHD1A6NHR9 2005 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 FGAP02671 866 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 ELNP15502 786 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 MTFR1Q15390 333 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 NKX2-3Q8TAU0 364 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 SHISA4Q96DD7 197 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 TANGO6Q9C0B7 1094 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 INCENPQ9NQS7 918 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 MTMR4Q9NYA4 1195 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 ADAMTS5Q9UNA0 930 aa20.7■□□□□ 0.9
HSPG2-204ENST00000412328 ORC4O43929 436 aa20.69■□□□□ 0.9
HSPG2-204ENST00000412328 DSG3P32926 999 aa20.69■□□□□ 0.9
HSPG2-204ENST00000412328 NOVP48745 357 aa20.69■□□□□ 0.9
HSPG2-204ENST00000412328 MLLT1Q03111 559 aaPredicted RBP20.69■□□□□ 0.9
HSPG2-204ENST00000412328 PDE4BQ07343 736 aa20.69■□□□□ 0.9
HSPG2-204ENST00000412328 GPR142Q7Z601 462 aa20.69■□□□□ 0.9
HSPG2-204ENST00000412328 NBPF11Q86T75 865 aa20.69■□□□□ 0.9
HSPG2-204ENST00000412328 MKL1Q969V6 931 aa20.69■□□□□ 0.9
HSPG2-204ENST00000412328 COA7Q96BR5 231 aa20.69■□□□□ 0.9
HSPG2-204ENST00000412328 ADCY3O60266 1144 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 MAPK4P31152 587 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 COG2Q14746 738 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 FAM47AQ5JRC9 791 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 MORN1Q5T089 497 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 REPS2Q8NFH8 660 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 ZNF287Q9HBT7 754 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 FBXO28Q9NVF7 368 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 SYNPO2Q9UMS6 1093 aa20.68■□□□□ 0.9
HSPG2-204ENST00000412328 LRRC37A2A6NM11 1700 aa20.67■□□□□ 0.9
HSPG2-204ENST00000412328 NDUFB10O96000 172 aa20.67■□□□□ 0.9
HSPG2-204ENST00000412328 CWC27Q6UX04 472 aaKnown RBP20.67■□□□□ 0.9
HSPG2-204ENST00000412328 TBC1D10CQ8IV04 446 aa20.67■□□□□ 0.9
HSPG2-204ENST00000412328 TRIB2Q92519 343 aa20.67■□□□□ 0.9
HSPG2-204ENST00000412328 ATG4CQ96DT6 458 aa20.67■□□□□ 0.9
HSPG2-204ENST00000412328 GOPCQ9HD26 462 aa20.67■□□□□ 0.9
HSPG2-204ENST00000412328 IL17RBQ9NRM6 502 aa20.67■□□□□ 0.9
HSPG2-204ENST00000412328 MCM3APO60318 1980 aa20.66■□□□□ 0.9
HSPG2-204ENST00000412328 INHAP05111 366 aa20.66■□□□□ 0.9
HSPG2-204ENST00000412328 EN2P19622 333 aaPredicted RBP20.66■□□□□ 0.9
HSPG2-204ENST00000412328 ATP2B2Q01814 1243 aa20.66■□□□□ 0.9
HSPG2-204ENST00000412328 FAM83BQ5T0W9 1011 aa20.66■□□□□ 0.9
HSPG2-204ENST00000412328 ZNF444Q8N0Y2 327 aaPredicted RBP20.66■□□□□ 0.9
HSPG2-204ENST00000412328 GMCL1P1Q8NEA9 526 aa20.66■□□□□ 0.9
HSPG2-204ENST00000412328 SOCS4Q8WXH5 440 aa20.66■□□□□ 0.9
HSPG2-204ENST00000412328 NUP88Q99567 741 aaPredicted RBP20.66■□□□□ 0.9
HSPG2-204ENST00000412328 F5H6K3 240 aa20.65■□□□□ 0.9
HSPG2-204ENST00000412328 HIP1O00291 1037 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms