RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 MB21D1Q8N884 522 aa19.27■□□□□ 0.68
DDR1-230ENST00000412274 DIAPH3Q9NSV4 1193 aa19.27■□□□□ 0.68
DDR1-230ENST00000412274 RBPJLQ9UBG7 517 aa19.27■□□□□ 0.68
DDR1-230ENST00000412274 CCDC171Q6TFL3 1326 aa19.26■□□□□ 0.67
DDR1-230ENST00000412274 UBXN2AP68543 259 aa19.26■□□□□ 0.67
DDR1-230ENST00000412274 PRKCZQ05513 592 aa19.26■□□□□ 0.67
DDR1-230ENST00000412274 SIAH1Q8IUQ4 282 aa19.26■□□□□ 0.67
DDR1-230ENST00000412274 FAM227BQ96M60 508 aa19.26■□□□□ 0.67
DDR1-230ENST00000412274 PLIN4Q96Q06 1357 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 A0A0D9SFI3 127 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 TSPY3P0CV98 308 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 TSPY8P0CW00 308 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 PCP11498 1178 aaKnown RBP19.25■□□□□ 0.67
DDR1-230ENST00000412274 FLT3LGP49771 235 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 NMIQ13287 307 aaPredicted RBP19.25■□□□□ 0.67
DDR1-230ENST00000412274 CCDC129Q6ZRS4 1044 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 SOCS4Q8WXH5 440 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 MKL1Q969V6 931 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 TANGO6Q9C0B7 1094 aa19.25■□□□□ 0.67
DDR1-230ENST00000412274 SMIM22K7EJ46 135 aa19.24■□□□□ 0.67
DDR1-230ENST00000412274 HSPD1P10809 573 aaKnown RBP19.24■□□□□ 0.67
DDR1-230ENST00000412274 SOX10P56693 466 aa19.24■□□□□ 0.67
DDR1-230ENST00000412274 ATP2B2Q01814 1243 aa19.24■□□□□ 0.67
DDR1-230ENST00000412274 TRMT44Q8IYL2 757 aaKnown RBP19.24■□□□□ 0.67
DDR1-230ENST00000412274 NEDD1Q8NHV4 660 aa19.24■□□□□ 0.67
DDR1-230ENST00000412274 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.24■□□□□ 0.67
DDR1-230ENST00000412274 IGKV6D-41A0A0C4DH26 115 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
DDR1-230ENST00000412274 ADCY3O60266 1144 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 TTLL1O95922 423 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 FGAP02671 866 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 TTC22Q5TAA0 569 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 PAGR1Q9BTK6 254 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 CWC22Q9HCG8 908 aaKnown RBP19.23■□□□□ 0.67
DDR1-230ENST00000412274 TXNRD2Q9NNW7 524 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 MTMR4Q9NYA4 1195 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 GABRQQ9UN88 632 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 GREB1LQ9C091 1923 aaPredicted RBP19.23■□□□□ 0.67
DDR1-230ENST00000412274 ZSWIM8A7E2V4 1837 aa19.23■□□□□ 0.67
DDR1-230ENST00000412274 FOXP2O15409 715 aa19.22■□□□□ 0.67
DDR1-230ENST00000412274 ORC4O43929 436 aa19.22■□□□□ 0.67
DDR1-230ENST00000412274 ECM2O94769 699 aaPredicted RBP19.22■□□□□ 0.67
DDR1-230ENST00000412274 FGRP09769 529 aa19.22■□□□□ 0.67
DDR1-230ENST00000412274 XRCC5P13010 732 aaKnown RBP19.22■□□□□ 0.67
DDR1-230ENST00000412274 DSG3P32926 999 aa19.22■□□□□ 0.67
DDR1-230ENST00000412274 VPS53Q5VIR6 699 aa19.22■□□□□ 0.67
DDR1-230ENST00000412274 STK11IPQ8N1F8 1099 aa19.22■□□□□ 0.67
DDR1-230ENST00000412274 NKX2-3Q8TAU0 364 aa19.22■□□□□ 0.67
DDR1-230ENST00000412274 NUDT12Q9BQG2 462 aa19.22■□□□□ 0.67
DDR1-230ENST00000412274 BIN2Q9UBW5 565 aaPredicted RBP19.22■□□□□ 0.67
DDR1-230ENST00000412274 RBBP6Q7Z6E9 1792 aaKnown RBP19.21■□□□□ 0.67
DDR1-230ENST00000412274 PRDM1O75626 825 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 FLOT1O75955 427 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 PDE4AP27815 886 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 TFAP4Q01664 338 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 Q3C1V9 767 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 CWC27Q6UX04 472 aaKnown RBP19.21■□□□□ 0.67
DDR1-230ENST00000412274 PLEKHH3Q7Z736 793 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 SH3TC2Q8TF17 1288 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 RUFY2Q8WXA3 655 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 RNF41Q9H4P4 317 aaPredicted RBP19.21■□□□□ 0.67
DDR1-230ENST00000412274 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 GJD2Q9UKL4 321 aa19.21■□□□□ 0.67
DDR1-230ENST00000412274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.21■□□□□ 0.67
DDR1-230ENST00000412274 TSPY2A6NKD2 308 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 F5H6K3 240 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 KLRC3Q07444 240 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 CENPQQ7L2Z9 268 aaPredicted RBP19.2■□□□□ 0.66
DDR1-230ENST00000412274 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
DDR1-230ENST00000412274 CLEC10AQ8IUN9 316 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 SPICE1Q8N0Z3 855 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 GMCL1P1Q8NEA9 526 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 SHCBP1Q8NEM2 672 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 CEP95Q96GE4 821 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 DSCC1Q9BVC3 393 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 CTNNA3Q9UI47 895 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 RAD50Q92878 1312 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 HTTP42858 3142 aa19.2■□□□□ 0.66
DDR1-230ENST00000412274 STRNO43815 780 aa19.19■□□□□ 0.66
DDR1-230ENST00000412274 CNMDO75829 334 aa19.19■□□□□ 0.66
DDR1-230ENST00000412274 COPB2P35606 906 aa19.19■□□□□ 0.66
DDR1-230ENST00000412274 RGS2P41220 211 aa19.19■□□□□ 0.66
DDR1-230ENST00000412274 GPR142Q7Z601 462 aa19.19■□□□□ 0.66
DDR1-230ENST00000412274 ADAMTS5Q9UNA0 930 aa19.19■□□□□ 0.66
DDR1-230ENST00000412274 IVNS1ABPQ9Y6Y0 642 aa19.19■□□□□ 0.66
DDR1-230ENST00000412274 SLC15A5A6NIM6 579 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 ZNF213O14771 459 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 SLC25A27O95847 323 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 FDX1P10109 184 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 CTDSPL2Q05D32 466 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 KIAA1755Q5JYT7 1200 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 SPATC1LQ9H0A9 340 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 MROH8Q9H579 483 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 TCP11L1Q9NUJ3 509 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 BTBD7Q9P203 1132 aa19.18■□□□□ 0.66
DDR1-230ENST00000412274 RAD21O60216 631 aa19.17■□□□□ 0.66
DDR1-230ENST00000412274 RANBP6O60518 1105 aaKnown RBP19.17■□□□□ 0.66
DDR1-230ENST00000412274 HMGCRP04035 888 aa19.17■□□□□ 0.66
DDR1-230ENST00000412274 FAM47AQ5JRC9 791 aa19.17■□□□□ 0.66
DDR1-230ENST00000412274 MORN1Q5T089 497 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms