RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 RAB21Q9UL25 225 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 TMCO1Q9UM00 188 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 SLC45A1Q9Y2W3 748 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 LMTK2Q8IWU2 1503 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 MYPNQ86TC9 1320 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 HTR3EA5X5Y0 456 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 TRIM43BA6NCK2 446 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 SMIM24O75264 130 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 ZSCAN22P10073 491 aaPredicted RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 CTCFP49711 727 aaPredicted RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 CDK17Q00537 523 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 DYNC1I2Q13409 638 aaKnown RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 ITGA7Q13683 1181 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 MAP7D1Q3KQU3 841 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 NAA16Q6N069 864 aaPredicted RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 PRPF40BQ6NWY9 871 aaKnown RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 YTHDF3Q7Z739 585 aaKnown RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 RSPH3Q86UC2 560 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 ZC3H15Q8WU90 426 aaKnown RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 APPBP2Q92624 585 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 RABGGTAQ92696 567 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 SRCIN1Q9C0H9 1055 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 AS3MTQ9HBK9 375 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 CFAP45Q9UL16 551 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 MAFFQ9ULX9 164 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 ABCC4O15439 1325 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 TTC21AQ8NDW8 1320 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 HSPA1AP0DMV8 641 aaKnown RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 HSPA1BP0DMV9 641 aaKnown RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 IQCEQ6IPM2 695 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 CYB5D1Q6P9G0 228 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 TRIM50Q86XT4 487 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 LNPKQ9C0E8 428 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 ALDH8A1Q9H2A2 487 aaPredicted RBP5.84□□□□□ -1.47
HERC4-205ENST00000412272 CHPF2Q9P2E5 772 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 ITGB1BP2Q9UKP3 347 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 IKBKGQ9Y6K9 419 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 PREX2Q70Z35 1606 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 SAMD9LQ8IVG5 1584 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 TRPM2O94759 1503 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 NSD2O96028 1365 aa5.84□□□□□ -1.47
HERC4-205ENST00000412272 ZCCHC11Q5TAX3 1644 aaKnown RBP5.84□□□□□ -1.48
HERC4-205ENST00000412272 GOLGA6L9A6NEM1 432 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 RGL2O15211 777 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 PRPF6O94906 941 aaKnown RBP5.84□□□□□ -1.48
HERC4-205ENST00000412272 ALDH2P05091 517 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 CCDC166P0CW27 439 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 ATP5JP18859 108 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 VARSP26640 1264 aaKnown RBP5.84□□□□□ -1.48
HERC4-205ENST00000412272 PSME1Q06323 249 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 TYRO3Q06418 890 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 BCL2A1Q16548 175 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 SLC2A7Q6PXP3 512 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 TTC39CQ8N584 583 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 RNF25Q96BH1 459 aaPredicted RBP5.84□□□□□ -1.48
HERC4-205ENST00000412272 C1orf74Q96LT6 269 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 NR1H4Q96RI1 486 aaPredicted RBP5.84□□□□□ -1.48
HERC4-205ENST00000412272 UIMC1Q96RL1 719 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 CDC5LQ99459 802 aaKnown RBP5.84□□□□□ -1.48
HERC4-205ENST00000412272 CBX8Q9HC52 389 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.84□□□□□ -1.48
HERC4-205ENST00000412272 C2CD2Q9Y426 696 aa5.84□□□□□ -1.48
HERC4-205ENST00000412272 NUP155O75694 1391 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 POTEB2H3BUK9 544 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 MEFVO15553 781 aaPredicted RBP5.83□□□□□ -1.48
HERC4-205ENST00000412272 RAPGEF3O95398 923 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 TUBBP07437 444 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 BTF3P20290 206 aaKnown RBP5.83□□□□□ -1.48
HERC4-205ENST00000412272 AARSP49588 968 aaKnown RBP eCLIP5.83□□□□□ -1.48
HERC4-205ENST00000412272 CRY1Q16526 586 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 FKBP15Q5T1M5 1219 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 CCDC121Q6ZUS5 278 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 VPS52Q8N1B4 723 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 TMEM57Q8N5G2 664 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 RASSF8Q8NHQ8 419 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 SLC16A10Q8TF71 515 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 MAIP1Q8WWC4 291 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 OPTNQ96CV9 577 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 PUS3Q9BZE2 481 aaKnown RBP5.83□□□□□ -1.48
HERC4-205ENST00000412272 VCX3BQ9H321 246 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 VIPAS39Q9H9C1 493 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 DCAF16Q9NXF7 216 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 ZFATQ9P243 1243 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 C15orf41Q9Y2V0 281 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 ARHGEF40Q8TER5 1519 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 NDUFAB1O14561 156 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 STAM2O75886 525 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 TMCC1O94876 653 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 MYBL1P10243 752 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 EVCP57679 992 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 SNW1Q13573 536 aaKnown RBP5.83□□□□□ -1.48
HERC4-205ENST00000412272 SKIDA1Q1XH10 827 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 NEPROQ6NW34 567 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 POTEEQ6S8J3 1075 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 MAATS1Q7Z4T9 603 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 CCDC13Q8IYE1 715 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 FUKQ8N0W3 1084 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 ERP27Q96DN0 273 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 PPP1R13BQ96KQ4 1090 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 TTC14Q96N46 770 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms