RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 VCXQ9H320 206 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 DISC1Q9NRI5 854 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 RAD50Q92878 1312 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 POLGP54098 1239 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 ZNF449Q6P9G9 518 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 BAG1Q99933 345 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 IVLP07476 585 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 CPA1P15085 419 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 SLC7A5P2Q9GIP4 190 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 PLEKHA4Q9H4M7 779 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 A0A1B0GVL5 298 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 PFDN6O15212 129 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 HHATQ5VTY9 493 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 NDUFB9Q9Y6M9 179 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 ALAS1P13196 640 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 ATF7P17544 494 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 KCNA6P17658 529 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 PIK3CAP42336 1068 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 PLCD1P51178 756 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 ADCY7P51828 1080 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 VWA3BQ502W6 1294 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 BICRAQ9NZM4 1560 aa12.4□□□□□ -0.43
PRPF40A-202ENST00000410080 TNNC2P02585 160 aa12.4□□□□□ -0.43
PRPF40A-202ENST00000410080 CEP85Q6P2H3 762 aa12.4□□□□□ -0.43
PRPF40A-202ENST00000410080 RAPH1Q70E73 1250 aa12.4□□□□□ -0.43
PRPF40A-202ENST00000410080 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.43
PRPF40A-202ENST00000410080 ANKRD44Q8N8A2 993 aa12.4□□□□□ -0.43
PRPF40A-202ENST00000410080 HDAC11Q96DB2 347 aa12.4□□□□□ -0.43
PRPF40A-202ENST00000410080 MRPL46Q9H2W6 279 aaKnown RBP12.4□□□□□ -0.43
PRPF40A-202ENST00000410080 HMGB1P1B2RPK0 211 aaPredicted RBP12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 KRT15P19012 456 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 TIMM10P62072 90 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 GNPTABQ3T906 1256 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 TBC1D32Q96NH3 1257 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 AP5M1Q9H0R1 490 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 HEXIM1O94992 359 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 TMOD1P28289 359 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 PCK1P35558 622 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 SCNN1DP51172 638 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 DMP1Q13316 513 aaPredicted RBP12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 RUFY3Q7L099 469 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 hCG_1642624A0A1W2PR95 340 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.434e-18■■□□□ 13
PRPF40A-202ENST00000410080 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 F13A1P00488 732 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 TBC1D8BQ0IIM8 1120 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 CACNA2D3Q8IZS8 1091 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 PDZD8Q8NEN9 1154 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 SYNRGQ9UMZ2 1314 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 BNIP3LO60238 219 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 GTF2IP78347 998 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 PRPSAP1Q14558 356 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 HS1BP3Q53T59 392 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 PRDM5Q9NQX1 630 aaPredicted RBP12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 CTTNBP2NLQ9P2B4 639 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 TRPM2O94759 1503 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 MGEA5O60502 916 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 NELFCDQ8IXH7 590 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 SNX29Q8TEQ0 813 aa12.39□□□□□ -0.43
PRPF40A-202ENST00000410080 ATP10BO94823 1461 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 PPFIBP2Q8ND30 876 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 FAM76AQ8TAV0 307 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 USP40Q9NVE5 1235 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 DLATP10515 647 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 LGSNQ5TDP6 509 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 SZRD1Q7Z422 152 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 MYLK4Q86YV6 388 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 CTAGE3PQ8IX95 158 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 N4BP2L2Q92802 583 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 BAG5Q9UL15 447 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 YWHAEP62258 255 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 HERC4Q5GLZ8 1057 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 JADE1Q6IE81 842 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 TTBK2Q6IQ55 1244 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 ANGPTL3Q9Y5C1 460 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 A0A1W2PP64 1363 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 MAP3K1Q13233 1512 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 CAVIN2O95810 425 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 TNFAIP1Q13829 316 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 LONRF3Q496Y0 759 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 ALKBH8Q96BT7 664 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 RTEL1Q9NZ71 1219 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 TLR3O15455 904 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 PBRM1Q86U86 1689 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 A0A1B0GUL7 405 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 SYNDIG1Q9H7V2 258 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 SEPT9Q9UHD8 586 aaPredicted RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 CPSF3Q9UKF6 684 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 LRRIQ4A6NIV6 560 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms