RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 GABPAQ06546 454 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 FMR1Q06787 632 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 PICALMQ13492 652 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 PGBD1Q96JS3 809 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 PRMT6Q96LA8 375 aaPredicted RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 OSBPL5Q9H0X9 879 aaPredicted RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 DDX4Q9NQI0 724 aaKnown RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 SERPINA10Q9UK55 444 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 SCAF8Q9UPN6 1271 aaKnown RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 PLEKHA8P1O95397 391 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 YEATS4O95619 227 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 MMP1P03956 469 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 KIF5BP33176 963 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-206ENST00000409754 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 MAP1SQ66K74 1059 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-206ENST00000409754 LDHDQ86WU2 507 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 MTMR14Q8NCE2 650 aa16.29■□□□□ 0.2
LIMS2-206ENST00000409754 FTOQ9C0B1 505 aaKnown RBP eCLIP16.29■□□□□ 0.2
LIMS2-206ENST00000409754 PLIN4Q96Q06 1357 aa16.28■□□□□ 0.2
LIMS2-206ENST00000409754 TOMM70O94826 608 aa16.28■□□□□ 0.2
LIMS2-206ENST00000409754 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
LIMS2-206ENST00000409754 SAFBQ15424 915 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIMS2-206ENST00000409754 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
LIMS2-206ENST00000409754 PNMA8AQ86V59 439 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-206ENST00000409754 PNMA1Q8ND90 353 aa16.28■□□□□ 0.2
LIMS2-206ENST00000409754 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIMS2-206ENST00000409754 SWAP70Q9UH65 585 aa16.28■□□□□ 0.2
LIMS2-206ENST00000409754 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
LIMS2-206ENST00000409754 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
LIMS2-206ENST00000409754 XBP1P17861 261 aa16.27■□□□□ 0.2
LIMS2-206ENST00000409754 NOVP48745 357 aa16.27■□□□□ 0.2
LIMS2-206ENST00000409754 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
LIMS2-206ENST00000409754 GRM4Q14833 912 aa16.27■□□□□ 0.2
LIMS2-206ENST00000409754 PKN1Q16512 942 aa16.27■□□□□ 0.2
LIMS2-206ENST00000409754 SRBD1Q8N5C6 995 aaKnown RBP16.27■□□□□ 0.2
LIMS2-206ENST00000409754 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
LIMS2-206ENST00000409754 RBM46Q8TBY0 533 aaKnown RBP16.27■□□□□ 0.2
LIMS2-206ENST00000409754 GGA3Q9NZ52 723 aa16.27■□□□□ 0.2
LIMS2-206ENST00000409754 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.19
LIMS2-206ENST00000409754 HLA-DOAP06340 250 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 LIG1P18858 919 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 GNAQP50148 359 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 OGFOD1Q8N543 542 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 BICD2Q8TD16 824 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 KCNG4Q8TDN1 519 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 IDI2Q9BXS1 227 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 FOXP1Q9H334 677 aaPredicted RBP16.27■□□□□ 0.19
LIMS2-206ENST00000409754 SERPINB13Q9UIV8 391 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 TAOK2Q9UL54 1235 aa16.27■□□□□ 0.19
LIMS2-206ENST00000409754 V9GY48 417 aaPredicted RBP16.27■□□□□ 0.19
LIMS2-206ENST00000409754 STK38Q15208 465 aa16.26■□□□□ 0.19
LIMS2-206ENST00000409754 ANO1Q5XXA6 986 aa16.26■□□□□ 0.19
LIMS2-206ENST00000409754 CHADLQ6NUI6 762 aa16.26■□□□□ 0.19
LIMS2-206ENST00000409754 DIS3L2Q8IYB7 885 aaKnown RBP16.26■□□□□ 0.19
LIMS2-206ENST00000409754 EHD4Q9H223 541 aa16.26■□□□□ 0.19
LIMS2-206ENST00000409754 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
LIMS2-206ENST00000409754 CLIC4Q9Y696 253 aa16.26■□□□□ 0.19
LIMS2-206ENST00000409754 TRPM7Q96QT4 1865 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 MYH6P13533 1939 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 TRAF5O00463 557 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 RBM5P52756 815 aaKnown RBP eCLIP16.25■□□□□ 0.19
LIMS2-206ENST00000409754 NFIAQ12857 509 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 ANGEL2Q5VTE6 544 aaKnown RBP16.25■□□□□ 0.19
LIMS2-206ENST00000409754 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 GLIS2Q9BZE0 524 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-206ENST00000409754 DHX36Q9H2U1 1008 aaKnown RBP16.25■□□□□ 0.19
LIMS2-206ENST00000409754 HDAC9Q9UKV0 1011 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 STX8Q9UNK0 236 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 KCNJ14Q9UNX9 436 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 SSC5DA1L4H1 1573 aa16.25■□□□□ 0.19
LIMS2-206ENST00000409754 CLRN2A0PK11 232 aa16.24■□□□□ 0.19
LIMS2-206ENST00000409754 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
LIMS2-206ENST00000409754 ME1P48163 572 aa16.24■□□□□ 0.19
LIMS2-206ENST00000409754 DLGAP5Q15398 846 aa16.24■□□□□ 0.19
LIMS2-206ENST00000409754 ZC3H15Q8WU90 426 aaKnown RBP16.24■□□□□ 0.19
LIMS2-206ENST00000409754 TSPY26PQ9H489 355 aa16.24■□□□□ 0.19
LIMS2-206ENST00000409754 TDRD3Q9H7E2 651 aaKnown RBP16.24■□□□□ 0.19
LIMS2-206ENST00000409754 DACT1Q9NYF0 836 aa16.24■□□□□ 0.19
LIMS2-206ENST00000409754 PASKQ96RG2 1323 aa16.24■□□□□ 0.19
LIMS2-206ENST00000409754 A0A1W2PQ27 194 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 A0A1W2PQ64 194 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 A0A1W2PQD8 194 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 BTBD18B2RXH4 712 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 SPTLC2O15270 562 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 MMP14P50281 582 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 CACNB3P54284 484 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 SLC39A14Q15043 492 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
LIMS2-206ENST00000409754 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 ADALQ6DHV7 355 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 CDAN1Q8IWY9 1227 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 CEP95Q96GE4 821 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms