RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SH3TC1Q8TE82 1336 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 P4HA1P13674 534 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 ALDH3A1P30838 453 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 ZSCAN20P17040 1043 aaPredicted RBP9.31□□□□□ -0.92
SCN9A-203ENST00000409672 TMOD1P28289 359 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 ERFEQ4G0M1 354 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 ZSCAN30Q86W11 494 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 ANAPC5Q9UJX4 755 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 LUC7L2Q9Y383 392 aaKnown RBP9.31□□□□□ -0.92
SCN9A-203ENST00000409672 K7ENM7 598 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
SCN9A-203ENST00000409672 ZAP70P43403 619 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 SPATA5Q8NB90 893 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 STMN2Q93045 179 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 GDF11O95390 407 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 PDE6AP16499 860 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 GNPTABQ3T906 1256 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 SYT10Q6XYQ8 523 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 RAPH1Q70E73 1250 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 ARMC9Q7Z3E5 817 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 CSGALNACT2Q8N6G5 542 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 STMN4Q9H169 189 aaPredicted RBP9.3□□□□□ -0.92
SCN9A-203ENST00000409672 NLRC4Q9NPP4 1024 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 DISP3Q9P2K9 1392 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 ARAP1Q96P48 1450 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 RIMS2Q9UQ26 1411 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 POTEB2H3BUK9 544 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 CYP4A11Q02928 519 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 RUFY3Q7L099 469 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 IQUBQ8NA54 791 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 FAM227BQ96M60 508 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 FAM8A1Q9UBU6 413 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 MAP3K5Q99683 1374 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 MAST3O60307 1309 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 IQGAP2Q13576 1575 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 CIB2O75838 187 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 GOLGA8FQ08AF8 430 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 GOLGA8DPQ0D2H9 430 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 CNNM4Q6P4Q7 775 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 SYNJ1O43426 1573 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 ZNF18P17022 549 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 RBBP5Q15291 538 aaKnown RBP9.3□□□□□ -0.92
SCN9A-203ENST00000409672 NUF2Q9BZD4 464 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 PIDD1Q9HB75 910 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 ABCC1P33527 1531 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 TOPBP1Q92547 1522 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 TYW5A2RUC4 315 aaKnown RBP9.3□□□□□ -0.92
SCN9A-203ENST00000409672 IGSF3O75054 1194 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 G2E3Q7L622 706 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 SLC10A4Q96EP9 437 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 TLR3O15455 904 aaKnown RBP9.3□□□□□ -0.92
SCN9A-203ENST00000409672 TNNC2P02585 160 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 CCDC121Q6ZUS5 278 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 PI4K2BQ8TCG2 481 aa9.3□□□□□ -0.92
SCN9A-203ENST00000409672 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 ARFGAP3Q9NP61 516 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 ELF1P32519 619 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 GCNAQ96QF7 691 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 NCAPGQ9BPX3 1015 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 HACD3Q9P035 362 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 STAM2O75886 525 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 HDAC11Q96DB2 347 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 YIPF2Q9BWQ6 316 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 VPS37BQ9H9H4 285 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 TRIM35Q9UPQ4 493 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 SMCO2A6NFE2 343 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 PPEF1O14829 653 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 ECE1P42892 770 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 SEPT6Q14141 434 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 ARHGEF6Q15052 776 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 ZBTB8OSQ8IWT0 167 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 CCDC105Q8IYK2 499 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 UBL4BQ8N7F7 174 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 NKIRAS1Q9NYS0 192 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 FAM184BQ9ULE4 1060 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 ARID4AP29374 1257 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 GBP7Q8N8V2 638 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 DKC1O60832 514 aaKnown RBP eCLIP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 SRGAP2CP0DJJ0 459 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 NFX1Q12986 1120 aaKnown RBP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 SRGAP1Q7Z6B7 1085 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 PGBD1Q96JS3 809 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 ZNF668Q96K58 619 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 CSRNP2Q9H175 543 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 INO80B-WBP1J3KQ70 363 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 KRT15P19012 456 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 TNFAIP1Q13829 316 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 AFAP1L2Q8N4X5 818 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 TMCO5AQ8N6Q1 288 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 BAG1Q99933 345 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 INO80BQ9C086 356 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-203ENST00000409672 SLAIN2Q9P270 581 aa9.29□□□□□ -0.92
SCN9A-203ENST00000409672 ATP8B2P98198 1209 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 CABP7Q86V35 215 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 PALM2Q8IXS6 379 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms