RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 XRCC6P12956 609 aaKnown RBP eCLIP27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 CDC37L1Q7L3B6 337 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 GTF3C6Q969F1 213 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 PODXL2Q9NZ53 605 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 A0A0D9SFI3 127 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 UBE3CQ15386 1083 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 GALNT17Q6IS24 598 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 KDM2BQ8NHM5 1336 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 FANCCQ00597 558 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 UNC5CLQ8IV45 518 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 CCDC125Q86Z20 511 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 ATP10DQ9P241 1426 aa27.82■■■□□ 2.04
SPIRE1-202ENST00000409402 TMEM232C9JQI7 657 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 ATP2C2O75185 946 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 TUBBP07437 444 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 ATRIPQ8WXE1 791 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 CTTNBP2NLQ9P2B4 639 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 PCDHB13Q9Y5F0 798 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 TLDC2A0PJX2 215 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 ARHGEF6Q15052 776 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 GABPB2Q8TAK5 448 aaPredicted RBP27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 SMC6Q96SB8 1091 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 SWAP70Q9UH65 585 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 ALDH3A1P30838 453 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 CCDC17Q96LX7 622 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 MED23Q9ULK4 1368 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 NR1I2O75469 434 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 GNA14O95837 355 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 PHKA1P46020 1223 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 GPBP1Q86WP2 473 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 HAUS2Q9NVX0 235 aa27.81■■■□□ 2.04
SPIRE1-202ENST00000409402 ZMYM6O95789 1325 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 RHOXF2BP0C7M4 288 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 NSMCE1Q8WV22 266 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 RHOXF2Q9BQY4 288 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 TEKT3Q9BXF9 490 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 COPRSQ9NQ92 184 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 IGSF1Q8N6C5 1336 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 KDM5CP41229 1560 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 SERPINA10Q9UK55 444 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 CCPG1Q9ULG6 757 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 PPP1R21Q6ZMI0 780 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 ZNF365Q70YC5 407 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 KRT26Q7Z3Y9 468 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 ANKARQ7Z5J8 1434 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 ANKS4BQ8N8V4 417 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 BLZF1Q9H2G9 400 aa27.8■■■□□ 2.04
SPIRE1-202ENST00000409402 KRT222Q8N1A0 295 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 TAB2Q9NYJ8 693 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 H0YCG3 227 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 CCNA1P78396 465 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 ERFEQ4G0M1 354 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 KCNK9Q9NPC2 374 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 PCDHA12Q9UN75 941 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 GOLGA8HP0CJ92 632 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 MAP7D1Q3KQU3 841 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 XKR9Q5GH70 373 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 THRAP3Q9Y2W1 955 aaKnown RBP27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 USP6P35125 1406 aa27.79■■■□□ 2.04
SPIRE1-202ENST00000409402 PALM3A6NDB9 673 aaPredicted RBP27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 SCG2P13521 617 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 NEK8Q86SG6 692 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 GPR108Q9NPR9 543 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 SSH2Q76I76 1423 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 CFAP157Q5JU67 520 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 CMTR1Q8N1G2 835 aaKnown RBP27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 CLRN2A0PK11 232 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 CSRNP1Q96S65 589 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 SUPT20HL1Q3ZLR7 823 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 CCDC84Q86UT8 332 aaPredicted RBP27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 NOSTRINQ8IVI9 506 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 SEC62Q99442 399 aaKnown RBP27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 KCTD2Q14681 263 aa27.78■■■□□ 2.04
SPIRE1-202ENST00000409402 FAM182BQ5T319 152 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 ADPGKQ9BRR6 497 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 ROBO2Q9HCK4 1378 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 RNF169Q8NCN4 708 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 RIOK1Q9BRS2 568 aaKnown RBP27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 LIG4P49917 911 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 USP14P54578 494 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 UBLCP1Q8WVY7 318 aaPredicted RBP27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 NFE2L3Q9Y4A8 694 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 FGAP02671 866 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 PLA2G4DQ86XP0 818 aa27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 NAPGQ99747 312 aaPredicted RBP27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 DDX25Q9UHL0 483 aaKnown RBP27.77■■■□□ 2.04
SPIRE1-202ENST00000409402 ACTN4O43707 911 aaKnown RBP27.76■■■□□ 2.04
SPIRE1-202ENST00000409402 KLHL30Q0D2K2 578 aa27.76■■■□□ 2.04
SPIRE1-202ENST00000409402 USTQ9Y2C2 406 aa27.76■■■□□ 2.04
SPIRE1-202ENST00000409402 OSBPP22059 807 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 TECP42680 631 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 ARFGAP2Q8N6H7 521 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 UAP1Q16222 522 aaPredicted RBP27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 ME3Q16798 604 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 MYSM1Q5VVJ2 828 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 PUS3Q9BZE2 481 aaKnown RBP27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 YARSP54577 528 aaKnown RBP27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 PROSER3Q2NL68 480 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 SFMBT2Q5VUG0 894 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms