RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 ARID4AP29374 1257 aaPredicted RBP9.46□□□□□ -0.9
LSM5-202ENST00000409292 CNGA1P29973 690 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 ERVK-9P63128 1117 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 ERVK-24P63145 666 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 ATP2B2Q01814 1243 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 MTX1Q13505 466 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 TBC1D9Q6ZT07 1266 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 GPR142Q7Z601 462 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 SH3RF3Q8TEJ3 882 aaPredicted RBP9.46□□□□□ -0.9
LSM5-202ENST00000409292 TGFBRAP1Q8WUH2 860 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 EDC3Q96F86 508 aaKnown RBP9.46□□□□□ -0.9
LSM5-202ENST00000409292 MEIS3Q99687 375 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 CABP5Q9NP86 173 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 AATFQ9NY61 560 aaKnown RBP eCLIP9.46□□□□□ -0.9
LSM5-202ENST00000409292 SLC5A4Q9NY91 659 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.46□□□□□ -0.9
LSM5-202ENST00000409292 ZBTB21Q9ULJ3 1066 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 PTPRFP10586 1907 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 CENPFP49454 3210 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 DOCK3Q8IZD9 2030 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 USP5P45974 858 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 PPP4CP60510 307 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 TRIM32Q13049 653 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 MAP2K5Q13163 448 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 MAP3K21Q5TCX8 1036 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 TMED8Q6PL24 325 aaPredicted RBP9.45□□□□□ -0.9
LSM5-202ENST00000409292 TTC6Q86TZ1 520 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 ARRDC4Q8NCT1 418 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 MTMR10Q9NXD2 777 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 RABGAP1Q9Y3P9 1069 aa9.45□□□□□ -0.9
LSM5-202ENST00000409292 SLC15A5A6NIM6 579 aa9.44□□□□□ -0.9
LSM5-202ENST00000409292 KBTBD13C9JR72 458 aa9.44□□□□□ -0.9
LSM5-202ENST00000409292 GDF11O95390 407 aa9.44□□□□□ -0.9
LSM5-202ENST00000409292 SLURP2P0DP57 97 aa9.44□□□□□ -0.9
LSM5-202ENST00000409292 MDM2Q00987 491 aaPredicted RBP9.44□□□□□ -0.9
LSM5-202ENST00000409292 CACNB2Q08289 660 aaPredicted RBP9.44□□□□□ -0.9
LSM5-202ENST00000409292 ZNF697Q5TEC3 545 aa9.44□□□□□ -0.9
LSM5-202ENST00000409292 FAM109BQ6ICB4 259 aaPredicted RBP9.44□□□□□ -0.9
LSM5-202ENST00000409292 SENP6Q9GZR1 1112 aaPredicted RBP9.44□□□□□ -0.9
LSM5-202ENST00000409292 GPR108Q9NPR9 543 aa9.44□□□□□ -0.9
LSM5-202ENST00000409292 LOC285556D6RIA3 1793 aa9.44□□□□□ -0.9
LSM5-202ENST00000409292 PHIPQ8WWQ0 1821 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 FLT1P17948 1338 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 MCAMP43121 646 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 RAB3GAP1Q15042 981 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 Q7L0L9 218 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 DPP9Q86TI2 863 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 LPAR1Q92633 364 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 RBPJLQ9UBG7 517 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 DDX20Q9UHI6 824 aaKnown RBP9.43□□□□□ -0.9
LSM5-202ENST00000409292 PALD1Q9ULE6 856 aa9.43□□□□□ -0.9
LSM5-202ENST00000409292 DDX60LQ5H9U9 1706 aaKnown RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 PFASO15067 1338 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 DNM1LO00429 736 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 IDH1O75874 414 aaKnown RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 GH2P01242 217 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 COL6A1P12109 1028 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 CYP7A1P22680 504 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 CCND3P30281 292 aaPredicted RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 MAP3K12Q12852 859 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 ZYXQ15942 572 aaKnown RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 ABCB5Q2M3G0 1257 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 MORN1Q5T089 497 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 PI16Q6UXB8 463 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
LSM5-202ENST00000409292 FRAT1Q92837 279 aaPredicted RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 ZNF512BQ96KM6 892 aaPredicted RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 ZFRQ96KR1 1074 aaKnown RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 C12orf42Q96LP6 360 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 PORCNQ9H237 461 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 TXNRD2Q9NNW7 524 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 TSHZ2Q9NRE2 1034 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 HOXC10Q9NYD6 342 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 SAP30BPQ9UHR5 308 aaKnown RBP9.42□□□□□ -0.9
LSM5-202ENST00000409292 SERPINB13Q9UIV8 391 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 ATAD5Q96QE3 1844 aa9.42□□□□□ -0.9
LSM5-202ENST00000409292 BRCA2P51587 3418 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 SOWAHBA6NEL2 793 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 STRNO43815 780 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 SURF6O75683 361 aaKnown RBP9.41□□□□□ -0.9
LSM5-202ENST00000409292 POLR3DP05423 398 aaPredicted RBP9.41□□□□□ -0.9
LSM5-202ENST00000409292 RARSP54136 660 aaKnown RBP9.41□□□□□ -0.9
LSM5-202ENST00000409292 CCL14Q16627 93 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 LRRC26Q2I0M4 334 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 Q3C1V9 767 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 CERKLQ49MI3 558 aaPredicted RBP9.41□□□□□ -0.9
LSM5-202ENST00000409292 TNNI3KQ59H18 835 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 METTL16Q86W50 562 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms