RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 ZKSCAN5Q9Y2L8 839 aa22.22■■□□□ 1.15
LIMS2-204ENST00000409286 NLRP5P59047 1200 aa22.21■■□□□ 1.15
LIMS2-204ENST00000409286 PLCB2Q00722 1185 aa22.21■■□□□ 1.15
LIMS2-204ENST00000409286 GABPAQ06546 454 aa22.21■■□□□ 1.15
LIMS2-204ENST00000409286 STRIP1Q5VSL9 837 aa22.21■■□□□ 1.15
LIMS2-204ENST00000409286 FAM13BQ9NYF5 915 aa22.21■■□□□ 1.15
LIMS2-204ENST00000409286 FOCADQ5VW36 1801 aa22.21■■□□□ 1.15
LIMS2-204ENST00000409286 TOP1P11387 765 aaKnown RBP22.2■■□□□ 1.15
LIMS2-204ENST00000409286 ZRSR1Q15695 479 aaKnown RBP22.2■■□□□ 1.15
LIMS2-204ENST00000409286 C11orf57Q6ZUT1 292 aaPredicted RBP22.2■■□□□ 1.15
LIMS2-204ENST00000409286 CEP57L1Q8IYX8 460 aa22.2■■□□□ 1.15
LIMS2-204ENST00000409286 STAG2Q8N3U4 1231 aa22.2■■□□□ 1.15
LIMS2-204ENST00000409286 C7orf43Q8WVR3 580 aa22.2■■□□□ 1.15
LIMS2-204ENST00000409286 MXD3Q9BW11 206 aa22.2■■□□□ 1.15
LIMS2-204ENST00000409286 KCNH3Q9ULD8 1083 aa22.2■■□□□ 1.15
LIMS2-204ENST00000409286 MYH1P12882 1939 aa22.2■■□□□ 1.14
LIMS2-204ENST00000409286 PLIN4Q96Q06 1357 aa22.2■■□□□ 1.14
LIMS2-204ENST00000409286 TRAPPC10P48553 1259 aa22.2■■□□□ 1.14
LIMS2-204ENST00000409286 HDLBPQ00341 1268 aaKnown RBP22.2■■□□□ 1.14
LIMS2-204ENST00000409286 APOBEC3HQ6NTF7 200 aaKnown RBP22.2■■□□□ 1.14
LIMS2-204ENST00000409286 CDC42EP5Q6NZY7 148 aa22.2■■□□□ 1.14
LIMS2-204ENST00000409286 DBNDD1Q9H9R9 158 aa22.2■■□□□ 1.14
LIMS2-204ENST00000409286 SWAP70Q9UH65 585 aa22.2■■□□□ 1.14
LIMS2-204ENST00000409286 GOLGA6L19H0YKK7 550 aa22.19■■□□□ 1.14
LIMS2-204ENST00000409286 SMARCA1P28370 1054 aa22.19■■□□□ 1.14
LIMS2-204ENST00000409286 PICALMQ13492 652 aa22.19■■□□□ 1.14
LIMS2-204ENST00000409286 EARS2Q5JPH6 523 aaKnown RBP22.19■■□□□ 1.14
LIMS2-204ENST00000409286 DDX4Q9NQI0 724 aaKnown RBP22.19■■□□□ 1.14
LIMS2-204ENST00000409286 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.19■■□□□ 1.14
LIMS2-204ENST00000409286 MYO3BQ8WXR4 1341 aa22.19■■□□□ 1.14
LIMS2-204ENST00000409286 ATP2B1P20020 1258 aa22.18■■□□□ 1.14
LIMS2-204ENST00000409286 CHRNA5P30532 468 aa22.18■■□□□ 1.14
LIMS2-204ENST00000409286 CRKP46108 304 aa22.18■■□□□ 1.14
LIMS2-204ENST00000409286 SCNN1DP51172 638 aa22.18■■□□□ 1.14
LIMS2-204ENST00000409286 NLRP12P59046 1061 aa22.18■■□□□ 1.14
LIMS2-204ENST00000409286 SF3B2Q13435 895 aaKnown RBP22.18■■□□□ 1.14
LIMS2-204ENST00000409286 GALNT17Q6IS24 598 aa22.18■■□□□ 1.14
LIMS2-204ENST00000409286 ZDHHC15Q96MV8 337 aa22.18■■□□□ 1.14
LIMS2-204ENST00000409286 BPIFA3Q9BQP9 254 aa22.18■■□□□ 1.14
LIMS2-204ENST00000409286 ECE2O60344 883 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 TPM3P06753 285 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 DACT2Q5SW24 774 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 KRBA2Q6ZNG9 492 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 SUPT20HQ8NEM7 779 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 CEP95Q96GE4 821 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 SPZ1Q9BXG8 430 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 OSBPL5Q9H0X9 879 aaPredicted RBP22.17■■□□□ 1.14
LIMS2-204ENST00000409286 TUBE1Q9UJT0 475 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 FAM205CA6NFA0 338 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 PARP1P09874 1014 aaKnown RBP22.17■■□□□ 1.14
LIMS2-204ENST00000409286 BAG6P46379 1132 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 GRIPAP1Q4V328 841 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 SARM1Q6SZW1 724 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 ERCC4Q92889 916 aaPredicted RBP22.17■■□□□ 1.14
LIMS2-204ENST00000409286 FERMT2Q96AC1 680 aa22.17■■□□□ 1.14
LIMS2-204ENST00000409286 HOOK1Q9UJC3 728 aaKnown RBP22.17■■□□□ 1.14
LIMS2-204ENST00000409286 SLX4Q8IY92 1834 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 BECN2A8MW95 431 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 GOLGA6L6A8MZA4 724 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 VEGFAP15692 232 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-204ENST00000409286 TTC38Q5R3I4 469 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 BLIDQ8IZY5 108 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 CCDC148Q8NFR7 591 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 PIBF1Q8WXW3 757 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 SERPINB13Q9UIV8 391 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 PCDHA4Q9UN74 947 aa22.16■■□□□ 1.14
LIMS2-204ENST00000409286 IGKV6D-41A0A0C4DH26 115 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 KLRF2D3W0D1 207 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 ZNF500O60304 480 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-204ENST00000409286 HLA-DOAP06340 250 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 ZNF75DP51815 510 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 SLC35G1Q2M3R5 365 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 LONRF3Q496Y0 759 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-204ENST00000409286 PLA2G4DQ86XP0 818 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 DHX40Q8IX18 779 aaKnown RBP22.15■■□□□ 1.14
LIMS2-204ENST00000409286 DAGLBQ8NCG7 672 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 CNNM3Q8NE01 707 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 KCNQ5Q9NR82 932 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 MTMR4Q9NYA4 1195 aa22.15■■□□□ 1.14
LIMS2-204ENST00000409286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.14■■□□□ 1.14
LIMS2-204ENST00000409286 CYTH3O43739 400 aa22.14■■□□□ 1.14
LIMS2-204ENST00000409286 GRIN1Q05586 938 aa22.14■■□□□ 1.14
LIMS2-204ENST00000409286 KIAA2012Q0VF49 1180 aa22.14■■□□□ 1.14
LIMS2-204ENST00000409286 EHD4Q9H223 541 aa22.14■■□□□ 1.14
LIMS2-204ENST00000409286 BARHL2Q9NY43 387 aa22.14■■□□□ 1.14
LIMS2-204ENST00000409286 NPM3O75607 178 aaKnown RBP22.14■■□□□ 1.13
LIMS2-204ENST00000409286 KANK3Q6NY19 840 aa22.14■■□□□ 1.13
LIMS2-204ENST00000409286 TRIM5Q9C035 493 aa22.14■■□□□ 1.13
LIMS2-204ENST00000409286 CSRNP2Q9H175 543 aa22.14■■□□□ 1.13
LIMS2-204ENST00000409286 ZNF219Q9P2Y4 722 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-204ENST00000409286 ZNF174Q15697 407 aa22.13■■□□□ 1.13
LIMS2-204ENST00000409286 PPP4R3BQ5MIZ7 849 aa22.13■■□□□ 1.13
LIMS2-204ENST00000409286 WWC2Q6AWC2 1192 aa22.13■■□□□ 1.13
LIMS2-204ENST00000409286 PIK3AP1Q6ZUJ8 805 aa22.13■■□□□ 1.13
LIMS2-204ENST00000409286 SERPINA10Q9UK55 444 aa22.13■■□□□ 1.13
LIMS2-204ENST00000409286 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.13■■□□□ 1.13
LIMS2-204ENST00000409286 C10orf71Q711Q0 1435 aa22.12■■□□□ 1.13
LIMS2-204ENST00000409286 STXBP3O00186 592 aa22.12■■□□□ 1.13
LIMS2-204ENST00000409286 AKR1B1P15121 316 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms