RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 SMAP1Q8IYB5 467 aaPredicted RBP11.34□□□□□ -0.59
KDM3A-202ENST00000409064 C16orf45Q96MC5 204 aaPredicted RBP11.34□□□□□ -0.59
KDM3A-202ENST00000409064 ADD3Q9UEY8 706 aaKnown RBP11.34□□□□□ -0.59
KDM3A-202ENST00000409064 ARHGEF40Q8TER5 1519 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 FAM196BA6NMK8 535 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 TTLL1O95922 423 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 GH2P01242 217 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 POLA2Q14181 598 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 HSP90B2PQ58FF3 399 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 ARGLU1Q9NWB6 273 aaPredicted RBP11.34□□□□□ -0.59
KDM3A-202ENST00000409064 STAP2Q9UGK3 403 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 ADCY9O60503 1353 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 GPSM2P81274 684 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 PRR16Q569H4 304 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 HACE1Q8IYU2 909 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 AMNQ9BXJ7 453 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 HACL1Q9UJ83 578 aa11.34□□□□□ -0.59
KDM3A-202ENST00000409064 ATP10DQ9P241 1426 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 CAVIN2O95810 425 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 BMP3P12645 472 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 SLC16A2P36021 539 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 SPP2Q13103 211 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 APOBEC3FQ8IUX4 373 aaKnown RBP11.33□□□□□ -0.6
KDM3A-202ENST00000409064 DYNLL2Q96FJ2 89 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 ZDHHC9Q9Y397 364 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 PPLO60437 1756 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 AKR1B10O60218 316 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 CSPG5O95196 566 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 MIER3Q7Z3K6 550 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 UBXN2AP68543 259 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 TTC38Q5R3I4 469 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 GPATCH4Q5T3I0 446 aaKnown RBP11.33□□□□□ -0.6
KDM3A-202ENST00000409064 DNM3Q9UQ16 869 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 NCAPD2Q15021 1401 aa11.33□□□□□ -0.6
KDM3A-202ENST00000409064 COL3A1P02461 1466 aaPredicted RBP11.33□□□□□ -0.6
KDM3A-202ENST00000409064 CCDC172P0C7W6 258 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 TYRO3Q06418 890 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 CALCRLQ16602 461 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 CCDC117Q8IWD4 279 aaPredicted RBP11.32□□□□□ -0.6
KDM3A-202ENST00000409064 FANCBQ8NB91 859 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 NEXMIFQ5QGS0 1516 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 CYP2D7A0A087X1C5 515 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 TMCO5BA8MYB1 307 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 PLCD1P51178 756 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 STX17P56962 302 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 ARID5AQ03989 594 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 ANO6Q4KMQ2 910 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 CCDC186Q7Z3E2 898 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
KDM3A-202ENST00000409064 LCORLQ8N3X6 602 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 NEMFO60524 1076 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 PTPN14Q15678 1187 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 SEPT7Q16181 437 aaKnown RBP11.32□□□□□ -0.6
KDM3A-202ENST00000409064 STX1AQ16623 288 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 COA7Q96BR5 231 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 CEP170BQ9Y4F5 1589 aaPredicted RBP11.32□□□□□ -0.6
KDM3A-202ENST00000409064 KIDINS220Q9ULH0 1771 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 RPL13P26373 211 aaKnown RBP11.32□□□□□ -0.6
KDM3A-202ENST00000409064 ADD1P35611 737 aaKnown RBP11.32□□□□□ -0.6
KDM3A-202ENST00000409064 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
KDM3A-202ENST00000409064 RTEL1Q9NZ71 1219 aa11.32□□□□□ -0.6
KDM3A-202ENST00000409064 CGNQ9P2M7 1197 aaKnown RBP11.32□□□□□ -0.6
KDM3A-202ENST00000409064 TRAF5O00463 557 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 HUNKP57058 714 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 PRPF4BQ13523 1007 aaKnown RBP11.31□□□□□ -0.6
KDM3A-202ENST00000409064 HERC4Q5GLZ8 1057 aaPredicted RBP11.31□□□□□ -0.6
KDM3A-202ENST00000409064 KRT40Q6A162 431 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 ACBD3Q9H3P7 528 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 USO1O60763 962 aaKnown RBP11.31□□□□□ -0.6
KDM3A-202ENST00000409064 TRPC3Q13507 836 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 DCAF17Q5H9S7 520 aaPredicted RBP11.31□□□□□ -0.6
KDM3A-202ENST00000409064 C17orf53Q8N3J3 647 aaPredicted RBP11.31□□□□□ -0.6
KDM3A-202ENST00000409064 GPKOWQ92917 476 aaPredicted RBP eCLIP11.31□□□□□ -0.65e-7■■□□□ 14.5
KDM3A-202ENST00000409064 PAXBP1Q9Y5B6 917 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 TMOD1P28289 359 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 OTUD6AQ7L8S5 288 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 CDAN1Q8IWY9 1227 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 CRAMP1Q96RY5 1269 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 STAT2P52630 851 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 BMS1Q14692 1282 aaKnown RBP11.31□□□□□ -0.6
KDM3A-202ENST00000409064 C9orf131Q5VYM1 1079 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 PLA2G4DQ86XP0 818 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 ISCA1Q9BUE6 129 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 FRMD4BQ9Y2L6 1034 aa11.31□□□□□ -0.6
KDM3A-202ENST00000409064 KIF2AO00139 706 aaPredicted RBP11.3□□□□□ -0.6
KDM3A-202ENST00000409064 PTGS1P23219 599 aa11.3□□□□□ -0.6
KDM3A-202ENST00000409064 NACA2Q9H009 215 aa11.3□□□□□ -0.6
KDM3A-202ENST00000409064 CEP83Q9Y592 693 aa11.3□□□□□ -0.6
KDM3A-202ENST00000409064 HOXD10P28358 340 aa11.3□□□□□ -0.6
KDM3A-202ENST00000409064 ADD2P35612 726 aa11.3□□□□□ -0.6
KDM3A-202ENST00000409064 SLC8A3P57103 927 aa11.3□□□□□ -0.6
KDM3A-202ENST00000409064 TEX35Q5T0J7 233 aa11.3□□□□□ -0.6
KDM3A-202ENST00000409064 DEPTORQ8TB45 409 aa11.3□□□□□ -0.6
KDM3A-202ENST00000409064 PSMD1Q99460 953 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms