RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 FAM83AQ86UY5 434 aa19.61■□□□□ 0.73
IRF1-202ENST00000405885 TRIM22Q8IYM9 498 aa19.61■□□□□ 0.73
IRF1-202ENST00000405885 LMBRD1Q9NUN5 540 aa19.61■□□□□ 0.73
IRF1-202ENST00000405885 STK36Q9NRP7 1315 aa19.61■□□□□ 0.73
IRF1-202ENST00000405885 USP17L5A8MUK1 530 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 H7C1D1 291 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 TTLL1O95922 423 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 HIRAP54198 1017 aaPredicted RBP19.6■□□□□ 0.73
IRF1-202ENST00000405885 GRM4Q14833 912 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 PKN1Q16512 942 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 GPR162Q16538 588 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 TPRNQ4KMQ1 711 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 CNTNAP5Q8WYK1 1306 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 KIF28PB7ZC32 967 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 FIBPO43427 364 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 GH2P01242 217 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 PPP2R5BQ15173 497 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 PRAMEF18Q5VWM3 479 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 KRT40Q6A162 431 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 SIAH1Q8IUQ4 282 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 CCDC17Q96LX7 622 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 TEPSINQ96N21 525 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 TFIP11Q9UBB9 837 aaKnown RBP19.6■□□□□ 0.73
IRF1-202ENST00000405885 KCNJ14Q9UNX9 436 aa19.6■□□□□ 0.73
IRF1-202ENST00000405885 GREB1LQ9C091 1923 aaPredicted RBP19.59■□□□□ 0.73
IRF1-202ENST00000405885 CYTH3O43739 400 aa19.59■□□□□ 0.73
IRF1-202ENST00000405885 ABCB5Q2M3G0 1257 aa19.59■□□□□ 0.73
IRF1-202ENST00000405885 ANGEL2Q5VTE6 544 aaKnown RBP19.59■□□□□ 0.73
IRF1-202ENST00000405885 FTOQ9C0B1 505 aaKnown RBP eCLIP19.59■□□□□ 0.73
IRF1-202ENST00000405885 FRMPD2Q68DX3 1309 aaPredicted RBP19.59■□□□□ 0.73
IRF1-202ENST00000405885 DEXIO95424 95 aa19.58■□□□□ 0.73
IRF1-202ENST00000405885 EEF2P13639 858 aaKnown RBP19.58■□□□□ 0.73
IRF1-202ENST00000405885 PDIA4P13667 645 aaKnown RBP19.58■□□□□ 0.73
IRF1-202ENST00000405885 KIF5BP33176 963 aa19.58■□□□□ 0.73
IRF1-202ENST00000405885 RNF26Q9BY78 433 aaPredicted RBP19.58■□□□□ 0.73
IRF1-202ENST00000405885 HERC5Q9UII4 1024 aaKnown RBP19.58■□□□□ 0.73
IRF1-202ENST00000405885 ATP6V1DQ9Y5K8 247 aa19.58■□□□□ 0.73
IRF1-202ENST00000405885 PALM3A6NDB9 673 aaPredicted RBP19.58■□□□□ 0.72
IRF1-202ENST00000405885 GOLGA6L22H0YM25 854 aa19.58■□□□□ 0.72
IRF1-202ENST00000405885 TRAK2O60296 914 aa19.58■□□□□ 0.72
IRF1-202ENST00000405885 PDHBP11177 359 aa19.58■□□□□ 0.72
IRF1-202ENST00000405885 USP48Q86UV5 1035 aa19.58■□□□□ 0.72
IRF1-202ENST00000405885 DEFB129Q9H1M3 183 aa19.58■□□□□ 0.72
IRF1-202ENST00000405885 VPS54Q9P1Q0 977 aa19.57■□□□□ 0.72
IRF1-202ENST00000405885 PRPF3O43395 683 aaKnown RBP19.56■□□□□ 0.72
IRF1-202ENST00000405885 RAD21O60216 631 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 GADD45BO75293 160 aaPredicted RBP19.56■□□□□ 0.72
IRF1-202ENST00000405885 MMP14P50281 582 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 CEBPZQ03701 1054 aaKnown RBP19.56■□□□□ 0.72
IRF1-202ENST00000405885 FZD1Q9UP38 647 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 KLRF2D3W0D1 207 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 TNNI2P48788 182 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 AKAP17AQ02040 695 aaKnown RBP19.56■□□□□ 0.72
IRF1-202ENST00000405885 KIF23Q02241 960 aaPredicted RBP19.56■□□□□ 0.72
IRF1-202ENST00000405885 ICA1Q05084 483 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 DLK2Q6UY11 383 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 TMEM179Q6ZVK1 233 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 MAP3K14Q99558 947 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 UBA5Q9GZZ9 404 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 GGA3Q9NZ52 723 aa19.56■□□□□ 0.72
IRF1-202ENST00000405885 PARP1P09874 1014 aaKnown RBP19.55■□□□□ 0.72
IRF1-202ENST00000405885 CCDC84Q86UT8 332 aaPredicted RBP19.55■□□□□ 0.72
IRF1-202ENST00000405885 ZSCAN16Q9H4T2 348 aaPredicted RBP19.55■□□□□ 0.72
IRF1-202ENST00000405885 KANSL2Q9H9L4 492 aa19.55■□□□□ 0.72
IRF1-202ENST00000405885 TNFAIP1Q13829 316 aa19.55■□□□□ 0.72
IRF1-202ENST00000405885 NBPF12Q5TAG4 269 aaPredicted RBP19.55■□□□□ 0.72
IRF1-202ENST00000405885 A0A1W2PRG0 241 aa19.54■□□□□ 0.72
IRF1-202ENST00000405885 TRIM29Q14134 588 aa19.54■□□□□ 0.72
IRF1-202ENST00000405885 GPT2Q8TD30 523 aa19.54■□□□□ 0.72
IRF1-202ENST00000405885 WASF1Q92558 559 aa19.54■□□□□ 0.72
IRF1-202ENST00000405885 GPKOWQ92917 476 aaPredicted RBP eCLIP19.54■□□□□ 0.72
IRF1-202ENST00000405885 GZF1Q9H116 711 aaPredicted RBP19.54■□□□□ 0.72
IRF1-202ENST00000405885 GPCPD1Q9NPB8 672 aa19.54■□□□□ 0.72
IRF1-202ENST00000405885 MYH6P13533 1939 aa19.54■□□□□ 0.72
IRF1-202ENST00000405885 MYH4Q9Y623 1939 aa19.54■□□□□ 0.72
IRF1-202ENST00000405885 ECE1P42892 770 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 KCTD1Q719H9 257 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 OXER1Q8TDS5 423 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 VAT1LQ9HCJ6 419 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 BTBD18B2RXH4 712 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 ADAMTS3O15072 1205 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 TBC1D12O60347 775 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 MMP1P03956 469 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 SNHG28P0DPA3 235 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 KRT85P78386 507 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 TTBK2Q6IQ55 1244 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 ZBTB21Q9ULJ3 1066 aa19.53■□□□□ 0.72
IRF1-202ENST00000405885 NR5A1Q13285 461 aa19.52■□□□□ 0.72
IRF1-202ENST00000405885 HOMER1Q86YM7 354 aa19.52■□□□□ 0.72
IRF1-202ENST00000405885 ACER1Q8TDN7 264 aa19.52■□□□□ 0.72
IRF1-202ENST00000405885 USP28Q96RU2 1077 aa19.52■□□□□ 0.72
IRF1-202ENST00000405885 CABP5Q9NP86 173 aa19.52■□□□□ 0.72
IRF1-202ENST00000405885 NYAP2Q9P242 653 aa19.52■□□□□ 0.72
IRF1-202ENST00000405885 DDX49Q9Y6V7 483 aaKnown RBP19.52■□□□□ 0.72
IRF1-202ENST00000405885 PHF20L1A8MW92 1017 aa19.52■□□□□ 0.71
IRF1-202ENST00000405885 SCG2P13521 617 aa19.52■□□□□ 0.71
IRF1-202ENST00000405885 SLC16A2P36021 539 aa19.52■□□□□ 0.71
IRF1-202ENST00000405885 PFKFB3Q16875 520 aaPredicted RBP19.52■□□□□ 0.71
IRF1-202ENST00000405885 TYW1BQ6NUM6 668 aa19.52■□□□□ 0.71
IRF1-202ENST00000405885 DIS3L2Q8IYB7 885 aaKnown RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms