RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CHMP4BP1P59074 171 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 BMS1Q14692 1282 aaKnown RBP7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 NBPF12Q5TAG4 269 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 SOGA3Q5TF21 947 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 MRM1Q6IN84 353 aaKnown RBP7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 KIAA1211LQ6NV74 962 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 FAM178BQ8IXR5 827 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 VWCEQ96DN2 955 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 PIF1Q9H611 641 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 ZSWIM4Q9H7M6 989 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 PRDM5Q9NQX1 630 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 MAPK8IP1Q9UQF2 711 aa7.56□□□□□ -1.2
HMGB3P19-201ENST00000403971 CBX7O95931 251 aa7.55□□□□□ -1.2
HMGB3P19-201ENST00000403971 SLC7A5Q01650 507 aa7.55□□□□□ -1.2
HMGB3P19-201ENST00000403971 AXDND1Q5T1B0 1012 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P19-201ENST00000403971 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
HMGB3P19-201ENST00000403971 FAM181AQ8N9Y4 354 aa7.55□□□□□ -1.2
HMGB3P19-201ENST00000403971 DHRS1Q96LJ7 313 aa7.55□□□□□ -1.2
HMGB3P19-201ENST00000403971 SIRPGQ9P1W8 387 aa7.55□□□□□ -1.2
HMGB3P19-201ENST00000403971 FAM221BA6H8Z2 402 aa7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 K7ELQ4 463 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 CYP27C1Q4G0S4 372 aa7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 CCDC144CPQ8IYA2 1237 aa7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 Q96M66 194 aa7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 OSBPL1AQ9BXW6 950 aa7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 MKRN2Q9H000 416 aaKnown RBP7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 LRRC4CQ9HCJ2 640 aa7.54□□□□□ -1.2
HMGB3P19-201ENST00000403971 SNW1Q13573 536 aaKnown RBP7.53□□□□□ -1.2
HMGB3P19-201ENST00000403971 DUSP27Q5VZP5 1158 aa7.53□□□□□ -1.2
HMGB3P19-201ENST00000403971 ZNF746Q6NUN9 644 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P19-201ENST00000403971 ZDHHC13Q8IUH4 622 aa7.53□□□□□ -1.2
HMGB3P19-201ENST00000403971 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
HMGB3P19-201ENST00000403971 SNTG2Q9NY99 539 aa7.53□□□□□ -1.2
HMGB3P19-201ENST00000403971 GTF2IRD1Q9UHL9 959 aa7.53□□□□□ -1.2
HMGB3P19-201ENST00000403971 MSRB2Q9Y3D2 182 aa7.53□□□□□ -1.2
HMGB3P19-201ENST00000403971 SHOXO15266 292 aa7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 GSC2O15499 205 aa7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 CYP7A1P22680 504 aa7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 CYP27A1Q02318 531 aa7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 RASA3Q14644 834 aa7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 FBXL18Q96ME1 805 aa7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 DEPDC7Q96QD5 511 aa7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 SRPK1Q96SB4 655 aaKnown RBP7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 ASPNQ9BXN1 380 aa7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 CDK11AQ9UQ88 783 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P19-201ENST00000403971 CBFA2T2O43439 604 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 IGHA1P01876 353 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 ITIH2P19823 946 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 OXCT1P55809 520 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 RNF4P78317 190 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 NCAPHQ15003 741 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 BBS9Q3SYG4 887 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 DTWD2Q8NBA8 298 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 HAUS7Q99871 368 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 SEMA6BQ9H3T3 888 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 ZNF451Q9Y4E5 1061 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 CAPN6Q9Y6Q1 641 aa7.51□□□□□ -1.21
HMGB3P19-201ENST00000403971 PRR19A6NJB7 356 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 EPHX1P07099 455 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 TNK2Q07912 1038 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 AUHQ13825 339 aaKnown RBP7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 NBPF9Q3BBW0 867 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 PRSS36Q5K4E3 855 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 MFSD4AQ8N468 514 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 FGD4Q96M96 766 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 CCDC113Q9H0I3 377 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 SUSD2Q9UGT4 822 aa7.5□□□□□ -1.21
HMGB3P19-201ENST00000403971 LOC105371045A0A1W2PR82 267 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 GNAT3A8MTJ3 354 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 PDPK1O15530 556 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 TGFB1P01137 390 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 ZNF865P0CJ78 1059 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 HEATR6Q6AI08 1181 aaKnown RBP7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 ARHGAP27Q6ZUM4 889 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 TMC3Q7Z5M5 1100 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 C7orf61Q8IZ16 206 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 SMARCC1Q92922 1105 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 MKL1Q969V6 931 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 KLHL25Q9H0H3 589 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 FBXL21Q9UKT6 434 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 MINPP1Q9UNW1 487 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 PLAGL2Q9UPG8 496 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 LEMD3Q9Y2U8 911 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 BICRAQ9NZM4 1560 aa7.49□□□□□ -1.21
HMGB3P19-201ENST00000403971 SHISA3A0PJX4 238 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 CYP26A1O43174 497 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 SUSD5O60279 629 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 ITGB7P26010 798 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 HOXA10P31260 410 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 KIR3DL1P43629 444 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 NKPD1Q17RQ9 610 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 C22orf34Q6ZV56 151 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 PLD6Q8N2A8 252 aaKnown RBP7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 BRF1Q92994 677 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 LGR4Q9BXB1 951 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms