RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 CCNA1P78396 465 aa21.28■■□□□ 1
THUMPD2-202ENST00000403537 CATSPERGQ6ZRH7 1159 aa21.28■■□□□ 1
THUMPD2-202ENST00000403537 GABRQQ9UN88 632 aa21.28■■□□□ 1
THUMPD2-202ENST00000403537 HSPD1P10809 573 aaKnown RBP21.27■■□□□ 1
THUMPD2-202ENST00000403537 ERVK-9P63128 1117 aa21.27■■□□□ 1
THUMPD2-202ENST00000403537 ERVK-24P63145 666 aa21.27■■□□□ 1
THUMPD2-202ENST00000403537 ICA1Q05084 483 aa21.27■■□□□ 1
THUMPD2-202ENST00000403537 LBX2Q6XYB7 198 aa21.27■■□□□ 1
THUMPD2-202ENST00000403537 SOCS4Q8WXH5 440 aa21.27■■□□□ 1
THUMPD2-202ENST00000403537 KANSL2Q9H9L4 492 aa21.27■■□□□ 1
THUMPD2-202ENST00000403537 ZSWIM8A7E2V4 1837 aa21.27■□□□□ 0.99
THUMPD2-202ENST00000403537 KIAA0100Q14667 2235 aaKnown RBP21.27■□□□□ 0.99
THUMPD2-202ENST00000403537 RBBP6Q7Z6E9 1792 aaKnown RBP21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 SGSM2O43147 1006 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 CDC45O75419 566 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 AKR1B1P15121 316 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 STK11IPQ8N1F8 1099 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 RPAP3Q9H6T3 665 aaPredicted RBP21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 MKNK2Q9HBH9 465 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 HOXC10Q9NYD6 342 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 RBPJLQ9UBG7 517 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 TMX2Q9Y320 296 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 RAD50Q92878 1312 aa21.26■□□□□ 0.99
THUMPD2-202ENST00000403537 MYH8P13535 1937 aa21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 ROBO3Q96MS0 1386 aa21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 LAMA4Q16363 1823 aa21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 MINDY4BA8MYZ0 360 aa21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 EN2P19622 333 aaPredicted RBP21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 TRMT44Q8IYL2 757 aaKnown RBP21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 ESYT1Q9BSJ8 1104 aa21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 PAGR1Q9BTK6 254 aa21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 NAPBQ9H115 298 aa21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 CWC22Q9HCG8 908 aaKnown RBP21.25■□□□□ 0.99
THUMPD2-202ENST00000403537 GJB1P08034 283 aa21.24■□□□□ 0.99
THUMPD2-202ENST00000403537 SLC3A2P08195 630 aaKnown RBP21.24■□□□□ 0.99
THUMPD2-202ENST00000403537 CCL5P13501 91 aa21.24■□□□□ 0.99
THUMPD2-202ENST00000403537 PTH1RQ03431 593 aa21.24■□□□□ 0.99
THUMPD2-202ENST00000403537 COG2Q14746 738 aa21.24■□□□□ 0.99
THUMPD2-202ENST00000403537 NUDT12Q9BQG2 462 aa21.24■□□□□ 0.99
THUMPD2-202ENST00000403537 TXNRD2Q9NNW7 524 aa21.24■□□□□ 0.99
THUMPD2-202ENST00000403537 MGAMO43451 1857 aa21.24■□□□□ 0.99
THUMPD2-202ENST00000403537 A0A1W2PRG0 241 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 MYCP01106 439 aaPredicted RBP21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 FGAP02671 866 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 MB21D1Q8N884 522 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 RUFY2Q8WXA3 655 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 TANGO6Q9C0B7 1094 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 RNF208Q9H0X6 261 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 VCPKMTQ9H867 229 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 GOPCQ9HD26 462 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 GJD2Q9UKL4 321 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 TACC3Q9Y6A5 838 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 PDE4DIPQ5VU43 2346 aa21.23■□□□□ 0.99
THUMPD2-202ENST00000403537 HMGCRP04035 888 aa21.22■□□□□ 0.99
THUMPD2-202ENST00000403537 INHAP05111 366 aa21.22■□□□□ 0.99
THUMPD2-202ENST00000403537 XRCC5P13010 732 aaKnown RBP21.22■□□□□ 0.99
THUMPD2-202ENST00000403537 MFAP1P55081 439 aaKnown RBP21.22■□□□□ 0.99
THUMPD2-202ENST00000403537 MTFR1Q15390 333 aa21.22■□□□□ 0.99
THUMPD2-202ENST00000403537 PLEKHH3Q7Z736 793 aa21.22■□□□□ 0.99
THUMPD2-202ENST00000403537 WDR46O15213 610 aaKnown RBP21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 ELNP15502 786 aa21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 GJA8P48165 433 aa21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 HAND2P61296 217 aa21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 CTDSPL2Q05D32 466 aa21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 PDE4BQ07343 736 aa21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 PPARAQ07869 468 aa21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 ALX1Q15699 326 aa21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 PRPF38BQ5VTL8 546 aaKnown RBP21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 NBPF3Q9H094 633 aa21.21■□□□□ 0.99
THUMPD2-202ENST00000403537 SPDYE16A6NNV3 312 aaPredicted RBP21.2■□□□□ 0.98
THUMPD2-202ENST00000403537 EEF2P13639 858 aaKnown RBP21.2■□□□□ 0.98
THUMPD2-202ENST00000403537 RASA1P20936 1047 aa21.2■□□□□ 0.98
THUMPD2-202ENST00000403537 RGS2P41220 211 aa21.2■□□□□ 0.98
THUMPD2-202ENST00000403537 ATP2B2Q01814 1243 aa21.2■□□□□ 0.98
THUMPD2-202ENST00000403537 DSCC1Q9BVC3 393 aa21.2■□□□□ 0.98
THUMPD2-202ENST00000403537 INCENPQ9NQS7 918 aa21.2■□□□□ 0.98
THUMPD2-202ENST00000403537 ZMYM6O95789 1325 aa21.2■□□□□ 0.98
THUMPD2-202ENST00000403537 Q3C1V9 767 aa21.19■□□□□ 0.98
THUMPD2-202ENST00000403537 PPP4R3BQ5MIZ7 849 aa21.19■□□□□ 0.98
THUMPD2-202ENST00000403537 GPR142Q7Z601 462 aa21.19■□□□□ 0.98
THUMPD2-202ENST00000403537 SIAH1Q8IUQ4 282 aa21.19■□□□□ 0.98
THUMPD2-202ENST00000403537 LSG1Q9H089 658 aaKnown RBP21.19■□□□□ 0.98
THUMPD2-202ENST00000403537 NYAP2Q9P242 653 aa21.19■□□□□ 0.98
THUMPD2-202ENST00000403537 SYNPO2Q9UMS6 1093 aa21.19■□□□□ 0.98
THUMPD2-202ENST00000403537 IVNS1ABPQ9Y6Y0 642 aa21.19■□□□□ 0.98
THUMPD2-202ENST00000403537 PRDM1O75626 825 aa21.18■□□□□ 0.98
THUMPD2-202ENST00000403537 CNMDO75829 334 aa21.18■□□□□ 0.98
THUMPD2-202ENST00000403537 FLOT1O75955 427 aa21.18■□□□□ 0.98
THUMPD2-202ENST00000403537 TBC1D10CQ8IV04 446 aa21.18■□□□□ 0.98
THUMPD2-202ENST00000403537 UNC93B1Q9H1C4 597 aa21.18■□□□□ 0.98
THUMPD2-202ENST00000403537 PORCNQ9H237 461 aa21.18■□□□□ 0.98
THUMPD2-202ENST00000403537 SLC15A5A6NIM6 579 aa21.17■□□□□ 0.98
THUMPD2-202ENST00000403537 DSG3P32926 999 aa21.17■□□□□ 0.98
THUMPD2-202ENST00000403537 MORN1Q5T089 497 aa21.17■□□□□ 0.98
THUMPD2-202ENST00000403537 SHCBP1Q8NEM2 672 aa21.17■□□□□ 0.98
THUMPD2-202ENST00000403537 U2AF1L4Q8WU68 220 aaKnown RBP21.17■□□□□ 0.98
THUMPD2-202ENST00000403537 APBA2Q99767 749 aa21.17■□□□□ 0.98
THUMPD2-202ENST00000403537 ANO2Q9NQ90 1003 aa21.17■□□□□ 0.98
THUMPD2-202ENST00000403537 TAF6LQ9Y6J9 622 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms