RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ZNF532Q9HCE3 1301 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 GREB1LQ9C091 1923 aaPredicted RBP14.47□□□□□ -0.09
LINC00544-201ENST00000400540 PRUNE2Q8WUY3 3088 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 APBB1O00213 710 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 MPHOSPH10O00566 681 aaKnown RBP14.47□□□□□ -0.09
LINC00544-201ENST00000400540 HOXC6P09630 235 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 ATN1P54259 1190 aaPredicted RBP14.47□□□□□ -0.09
LINC00544-201ENST00000400540 ATP2B2Q01814 1243 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 SLFNL1Q499Z3 407 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 SLC9C2Q5TAH2 1124 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 ERC1Q8IUD2 1116 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 CLEC10AQ8IUN9 316 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 LCORLQ8N3X6 602 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 MTMR10Q9NXD2 777 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
LINC00544-201ENST00000400540 SPTBN5Q9NRC6 3674 aaKnown RBP14.46□□□□□ -0.09
LINC00544-201ENST00000400540 TCRBV5S4A2TA0A5A2 114 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 GOLIM4O00461 696 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 IGHA2P01877 340 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 CYBAP13498 195 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 ANO1Q5XXA6 986 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 LPAR1Q92633 364 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 DNAJC2Q99543 621 aaKnown RBP14.46□□□□□ -0.09
LINC00544-201ENST00000400540 MOV10L1Q9BXT6 1211 aaKnown RBP14.46□□□□□ -0.09
LINC00544-201ENST00000400540 CRNKL1Q9BZJ0 848 aaKnown RBP14.46□□□□□ -0.09
LINC00544-201ENST00000400540 TANGO6Q9C0B7 1094 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 BCL11AQ9H165 835 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 MYH4Q9Y623 1939 aa14.46□□□□□ -0.09
LINC00544-201ENST00000400540 CUL9Q8IWT3 2517 aa14.46□□□□□ -0.1
LINC00544-201ENST00000400540 SMIM22K7EJ46 135 aa14.45□□□□□ -0.1
LINC00544-201ENST00000400540 ADORA2AP29274 412 aa14.45□□□□□ -0.1
LINC00544-201ENST00000400540 TTF1Q15361 905 aaPredicted RBP14.45□□□□□ -0.1
LINC00544-201ENST00000400540 GJC2Q5T442 439 aaPredicted RBP14.45□□□□□ -0.1
LINC00544-201ENST00000400540 TMED8Q6PL24 325 aaPredicted RBP14.45□□□□□ -0.1
LINC00544-201ENST00000400540 DYNLL2Q96FJ2 89 aa14.45□□□□□ -0.1
LINC00544-201ENST00000400540 DCP1AQ9NPI6 582 aaPredicted RBP14.45□□□□□ -0.1
LINC00544-201ENST00000400540 STXBP5LQ9Y2K9 1186 aa14.45□□□□□ -0.1
LINC00544-201ENST00000400540 DNM1LO00429 736 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 COBLO75128 1261 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 CHGBP05060 677 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 AKR1B1P15121 316 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 ERCC3P19447 782 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 RTP1P59025 263 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 COG2Q14746 738 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 DPP9Q86TI2 863 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 SPATC1LQ9H0A9 340 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 ARMT1Q9H993 441 aa14.44□□□□□ -0.1
LINC00544-201ENST00000400540 CYP2D7A0A087X1C5 515 aa14.43□□□□□ -0.1
LINC00544-201ENST00000400540 PRKAB2O43741 272 aa14.43□□□□□ -0.1
LINC00544-201ENST00000400540 MSCO60682 206 aa14.43□□□□□ -0.1
LINC00544-201ENST00000400540 SAMD1Q6SPF0 538 aaPredicted RBP14.43□□□□□ -0.1
LINC00544-201ENST00000400540 SIAH1Q8IUQ4 282 aa14.43□□□□□ -0.1
LINC00544-201ENST00000400540 SPICE1Q8N0Z3 855 aa14.43□□□□□ -0.1
LINC00544-201ENST00000400540 ATG4CQ96DT6 458 aa14.43□□□□□ -0.1
LINC00544-201ENST00000400540 ATP11BQ9Y2G3 1177 aa14.43□□□□□ -0.1
LINC00544-201ENST00000400540 MCM3APO60318 1980 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 MBD4O95243 580 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 PLS1Q14651 629 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 PRAMEF19Q5SWL8 479 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 OLFML2BQ68BL8 750 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 TMEM179Q6ZVK1 233 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 SIRT2Q8IXJ6 389 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC00544-201ENST00000400540 FAM161BQ96MY7 647 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 HOXC10Q9NYD6 342 aa14.42□□□□□ -0.1
LINC00544-201ENST00000400540 FLOT1O75955 427 aa14.41□□□□□ -0.1
LINC00544-201ENST00000400540 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
LINC00544-201ENST00000400540 IFIT2P09913 472 aaKnown RBP14.41□□□□□ -0.1
LINC00544-201ENST00000400540 DSG3P32926 999 aa14.41□□□□□ -0.1
LINC00544-201ENST00000400540 ICA1Q05084 483 aa14.41□□□□□ -0.1
LINC00544-201ENST00000400540 HSP90AB4PQ58FF6 505 aa14.41□□□□□ -0.1
LINC00544-201ENST00000400540 NCAPG2Q86XI2 1143 aa14.41□□□□□ -0.1
LINC00544-201ENST00000400540 CLASRPQ8N2M8 674 aaKnown RBP14.41□□□□□ -0.1
LINC00544-201ENST00000400540 SHCBP1Q8NEM2 672 aa14.41□□□□□ -0.1
LINC00544-201ENST00000400540 KIF1BPQ96EK5 621 aa14.41□□□□□ -0.1
LINC00544-201ENST00000400540 GUCD1Q96NT3 240 aa14.41□□□□□ -0.1
LINC00544-201ENST00000400540 LBHD1Q9BQE6 289 aaPredicted RBP14.41□□□□□ -0.1
LINC00544-201ENST00000400540 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 SEPT4O43236 478 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 STRNO43815 780 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 ADD2P35612 726 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 TMEM132BQ14DG7 1078 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 TRIM60Q495X7 471 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 FAM47AQ5JRC9 791 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 SLC39A5Q6ZMH5 540 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 MAML3Q96JK9 1138 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 BOLA2Q9H3K6 86 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 ARHGEF10LQ9HCE6 1279 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 PRDM5Q9NQX1 630 aaPredicted RBP14.4□□□□□ -0.1
LINC00544-201ENST00000400540 PAG1Q9NWQ8 432 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 SWAP70Q9UH65 585 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 TMX2Q9Y320 296 aa14.4□□□□□ -0.1
LINC00544-201ENST00000400540 KBTBD13C9JR72 458 aa14.39□□□□□ -0.11
LINC00544-201ENST00000400540 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
LINC00544-201ENST00000400540 MIER1Q8N108 512 aa14.39□□□□□ -0.11
LINC00544-201ENST00000400540 MB21D1Q8N884 522 aa14.39□□□□□ -0.11
LINC00544-201ENST00000400540 ARRDC4Q8NCT1 418 aa14.39□□□□□ -0.11
LINC00544-201ENST00000400540 FERMT2Q96AC1 680 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms