RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 DDAH1O94760 285 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 CALM1P0DP23 149 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 CALM2P0DP24 149 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 CALM3P0DP25 149 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 OSBPP22059 807 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 MCM5P33992 734 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 KIF23Q02241 960 aaPredicted RBP8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L24Q0WX57 530 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 SART3Q15020 963 aaKnown RBP8.87□□□□□ -0.99
USP16-204ENST00000399976 PRAMEF18Q5VWM3 479 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 SHCBP1Q8NEM2 672 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 BRI3BPQ8WY22 251 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 DYNLL2Q96FJ2 89 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 TACC3Q9Y6A5 838 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 PLXNA1Q9UIW2 1896 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 EXOSC10Q01780 885 aaKnown RBP8.86□□□□□ -0.99
USP16-204ENST00000399976 ZSCAN10Q96SZ4 725 aaPredicted RBP8.86□□□□□ -0.99
USP16-204ENST00000399976 ANO2Q9NQ90 1003 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 PRDM10Q9NQV6 1147 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 IL17RBQ9NRM6 502 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 ZHX2Q9Y6X8 837 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 SRCAPQ6ZRS2 3230 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 CCL15-CCL14A0A0B4J2E2 113 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 LOC102724159A0A0B4J2E5 919 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 JAG1P78504 1218 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 TFAP4Q01664 338 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 TRAF1Q13077 416 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 PWP2Q15269 919 aaKnown RBP8.86□□□□□ -0.99
USP16-204ENST00000399976 CCL15Q16663 113 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 GPATCH4Q5T3I0 446 aaKnown RBP8.86□□□□□ -0.99
USP16-204ENST00000399976 CYP4F22Q6NT55 531 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 CATSPERGQ6ZRH7 1159 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 MOB2Q70IA6 237 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 CHMP4CQ96CF2 233 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 LZTS2Q9BRK4 669 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 FEM1BQ9UK73 627 aa8.86□□□□□ -0.99
USP16-204ENST00000399976 CYP2D7A0A087X1C5 515 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 TSPY2A6NKD2 308 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 IRF5Q13568 498 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 SEPT2Q15019 361 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 ARHGEF6Q15052 776 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 TKFCQ3LXA3 575 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 ASPRV1Q53RT3 343 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 RALYLQ86SE5 291 aaKnown RBP8.85□□□□□ -0.99
USP16-204ENST00000399976 OTUD5Q96G74 571 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 TANGO6Q9C0B7 1094 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 ZFYVE28Q9HCC9 887 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 ZSWIM6Q9HCJ5 1215 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 EEF2P13639 858 aaKnown RBP8.85□□□□□ -0.99
USP16-204ENST00000399976 CTDSPL2Q05D32 466 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 CEP95Q96GE4 821 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 GOLGB1Q14789 3259 aaKnown RBP8.85□□□□□ -0.99
USP16-204ENST00000399976 GHRHRQ02643 423 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 FAM110CQ1W6H9 321 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 DLK2Q6UY11 383 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 DHX32Q7L7V1 743 aaKnown RBP8.85□□□□□ -0.99
USP16-204ENST00000399976 SLC44A5Q8NCS7 719 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 ZSWIM5Q9P217 1185 aa8.85□□□□□ -0.99
USP16-204ENST00000399976 TLR2O60603 784 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 BCRP11274 1271 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 STOX1Q6ZVD7 989 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 IGDCC4Q8TDY8 1250 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 NEK1Q96PY6 1258 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 HOXC10Q9NYD6 342 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 SNX14Q9Y5W7 946 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 LCTP09848 1927 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 FRMPD3Q5JV73 1810 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 A0A1W2PRG0 241 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 BTBD19C9JJ37 291 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 SH2B2O14492 632 aaPredicted RBP8.84□□□□□ -0.99
USP16-204ENST00000399976 GDF11O95390 407 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 VCAM1P19320 739 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 SPP2Q13103 211 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 C17orf99Q6UX52 265 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 ABRAQ8N0Z2 381 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 CHURC1Q8WUH1 139 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 MTMR8Q96EF0 704 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 PTPN18Q99952 460 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 RNF186Q9NXI6 227 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 RABGAP1Q9Y3P9 1069 aa8.84□□□□□ -0.99
USP16-204ENST00000399976 ZNFX1Q9P2E3 1918 aaKnown RBP8.84□□□□□ -0.99
USP16-204ENST00000399976 ERICH2A1L162 156 aa8.83□□□□□ -1
USP16-204ENST00000399976 hCG_1984214I3L0E3 225 aa8.83□□□□□ -1
USP16-204ENST00000399976 IGF2BP3O00425 579 aaKnown RBP eCLIP8.83□□□□□ -1
USP16-204ENST00000399976 CTCFP49711 727 aaPredicted RBP8.83□□□□□ -1
USP16-204ENST00000399976 GNAQP50148 359 aa8.83□□□□□ -1
USP16-204ENST00000399976 MTMR2Q13614 643 aa8.83□□□□□ -1
USP16-204ENST00000399976 ANKRD1Q15327 319 aa8.83□□□□□ -1
USP16-204ENST00000399976 ZNF713Q8N859 430 aaPredicted RBP8.83□□□□□ -1
USP16-204ENST00000399976 ENAHQ8N8S7 591 aaPredicted RBP8.83□□□□□ -1
USP16-204ENST00000399976 UBAC1Q9BSL1 405 aa8.83□□□□□ -1
USP16-204ENST00000399976 TNKSO95271 1327 aa8.83□□□□□ -1
USP16-204ENST00000399976 FAM196BA6NMK8 535 aa8.83□□□□□ -1
USP16-204ENST00000399976 DSG3P32926 999 aa8.83□□□□□ -1
USP16-204ENST00000399976 ANTXR2P58335 489 aa8.83□□□□□ -1
USP16-204ENST00000399976 EVX2Q03828 476 aa8.83□□□□□ -1
USP16-204ENST00000399976 GRM4Q14833 912 aa8.83□□□□□ -1
USP16-204ENST00000399976 RBM28Q9NW13 759 aaKnown RBP8.83□□□□□ -1
USP16-204ENST00000399976 MAP3K20Q9NYL2 800 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms