RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 COG2Q14746 738 aa22.08■■□□□ 1.13
UFD1-202ENST00000399523 ABCB5Q2M3G0 1257 aa22.08■■□□□ 1.13
UFD1-202ENST00000399523 CERKLQ49MI3 558 aaPredicted RBP22.08■■□□□ 1.13
UFD1-202ENST00000399523 FAM47AQ5JRC9 791 aa22.08■■□□□ 1.13
UFD1-202ENST00000399523 PRAMEF19Q5SWL8 479 aa22.08■■□□□ 1.13
UFD1-202ENST00000399523 SPATC1LQ9H0A9 340 aa22.08■■□□□ 1.13
UFD1-202ENST00000399523 ZNF576Q9H609 170 aa22.08■■□□□ 1.13
UFD1-202ENST00000399523 SLC5A4Q9NY91 659 aa22.08■■□□□ 1.13
UFD1-202ENST00000399523 HOXC10Q9NYD6 342 aa22.08■■□□□ 1.13
UFD1-202ENST00000399523 ERCC3P19447 782 aa22.07■■□□□ 1.12
UFD1-202ENST00000399523 G3BP1Q13283 466 aaKnown RBP eCLIP22.07■■□□□ 1.12
UFD1-202ENST00000399523 ABRAQ8N0Z2 381 aa22.07■■□□□ 1.12
UFD1-202ENST00000399523 RAPGEFL1Q9UHV5 662 aa22.07■■□□□ 1.12
UFD1-202ENST00000399523 RAG1P15918 1043 aa22.06■■□□□ 1.12
UFD1-202ENST00000399523 GUCY1A2P33402 732 aa22.06■■□□□ 1.12
UFD1-202ENST00000399523 FPGSQ05932 587 aa22.06■■□□□ 1.12
UFD1-202ENST00000399523 TTC39AQ5SRH9 613 aa22.06■■□□□ 1.12
UFD1-202ENST00000399523 ATXN2LQ8WWM7 1075 aaKnown RBP22.06■■□□□ 1.12
UFD1-202ENST00000399523 ZNF512BQ96KM6 892 aaPredicted RBP22.06■■□□□ 1.12
UFD1-202ENST00000399523 CABP5Q9NP86 173 aa22.06■■□□□ 1.12
UFD1-202ENST00000399523 GPR108Q9NPR9 543 aa22.06■■□□□ 1.12
UFD1-202ENST00000399523 ZNFX1Q9P2E3 1918 aaKnown RBP22.06■■□□□ 1.12
UFD1-202ENST00000399523 CT47B1P0C2W7 299 aaPredicted RBP22.05■■□□□ 1.12
UFD1-202ENST00000399523 CYP7A1P22680 504 aa22.05■■□□□ 1.12
UFD1-202ENST00000399523 CCDC158Q5M9N0 1113 aa22.05■■□□□ 1.12
UFD1-202ENST00000399523 CERS3Q8IU89 383 aa22.05■■□□□ 1.12
UFD1-202ENST00000399523 MAML3Q96JK9 1138 aa22.05■■□□□ 1.12
UFD1-202ENST00000399523 MROH8Q9H579 483 aa22.05■■□□□ 1.12
UFD1-202ENST00000399523 PIH1D3Q9NQM4 214 aaKnown RBP22.05■■□□□ 1.12
UFD1-202ENST00000399523 NRBP1Q9UHY1 535 aa22.05■■□□□ 1.12
UFD1-202ENST00000399523 A0A0G2JMZ2 1700 aa22.04■■□□□ 1.12
UFD1-202ENST00000399523 CHD9Q3L8U1 2897 aa22.04■■□□□ 1.12
UFD1-202ENST00000399523 SHMT1P34896 483 aa22.04■■□□□ 1.12
UFD1-202ENST00000399523 TTC6Q86TZ1 520 aa22.04■■□□□ 1.12
UFD1-202ENST00000399523 TRMT2AQ8IZ69 625 aaKnown RBP22.04■■□□□ 1.12
UFD1-202ENST00000399523 MB21D1Q8N884 522 aa22.04■■□□□ 1.12
UFD1-202ENST00000399523 TIFAQ96CG3 184 aa22.04■■□□□ 1.12
UFD1-202ENST00000399523 DBNDD2Q9BQY9 259 aa22.04■■□□□ 1.12
UFD1-202ENST00000399523 XPNPEP3Q9NQH7 507 aa22.04■■□□□ 1.12
UFD1-202ENST00000399523 PNMA6EA0A0J9YXQ4 647 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 RARBP10826 455 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 PLA2G5P39877 138 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 ZAP70P43403 619 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 USP5P45974 858 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 AKNAD1Q5T1N1 836 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 CDCA7LQ96GN5 454 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 TOX2Q96NM4 488 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 ASB2Q96Q27 587 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 TMEM39AQ9NV64 488 aa22.03■■□□□ 1.12
UFD1-202ENST00000399523 A0A1W2PQ45 241 aaPredicted RBP22.02■■□□□ 1.12
UFD1-202ENST00000399523 A0A1W2PQY0 241 aa22.02■■□□□ 1.12
UFD1-202ENST00000399523 A0A1W2PRG0 241 aa22.02■■□□□ 1.12
UFD1-202ENST00000399523 PQBP1O60828 265 aaKnown RBP22.02■■□□□ 1.12
UFD1-202ENST00000399523 TNNI3KQ59H18 835 aa22.02■■□□□ 1.12
UFD1-202ENST00000399523 ANKRD33Q7Z3H0 272 aa22.02■■□□□ 1.12
UFD1-202ENST00000399523 RNF180Q86T96 592 aa22.02■■□□□ 1.12
UFD1-202ENST00000399523 MIGA1Q8NAN2 632 aa22.02■■□□□ 1.12
UFD1-202ENST00000399523 ARHGAP45Q92619 1136 aa22.02■■□□□ 1.12
UFD1-202ENST00000399523 FPGT-TNNI3KV9GXZ4 949 aa22.02■■□□□ 1.12
UFD1-202ENST00000399523 PLCD1P51178 756 aa22.01■■□□□ 1.11
UFD1-202ENST00000399523 FAAP100Q0VG06 881 aa22.01■■□□□ 1.11
UFD1-202ENST00000399523 SEPT2Q15019 361 aa22.01■■□□□ 1.11
UFD1-202ENST00000399523 TANGO6Q9C0B7 1094 aa22.01■■□□□ 1.11
UFD1-202ENST00000399523 PGK1P00558 417 aa22■■□□□ 1.11
UFD1-202ENST00000399523 GNAI2P04899 355 aa22■■□□□ 1.11
UFD1-202ENST00000399523 NCAPG2Q86XI2 1143 aa22■■□□□ 1.11
UFD1-202ENST00000399523 ADAMTS19Q8TE59 1207 aa22■■□□□ 1.11
UFD1-202ENST00000399523 GAS2L1Q99501 681 aaPredicted RBP22■■□□□ 1.11
UFD1-202ENST00000399523 THEGQ9P2T0 379 aa22■■□□□ 1.11
UFD1-202ENST00000399523 ROBO3Q96MS0 1386 aa21.99■■□□□ 1.11
UFD1-202ENST00000399523 FCER1AP12319 257 aa21.99■■□□□ 1.11
UFD1-202ENST00000399523 DSG3P32926 999 aa21.99■■□□□ 1.11
UFD1-202ENST00000399523 GABPAQ06546 454 aa21.99■■□□□ 1.11
UFD1-202ENST00000399523 SLC44A5Q8NCS7 719 aa21.99■■□□□ 1.11
UFD1-202ENST00000399523 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.99■■□□□ 1.116e-7■■□□□ 13.8
UFD1-202ENST00000399523 TSEN34Q9BSV6 310 aaKnown RBP21.99■■□□□ 1.11
UFD1-202ENST00000399523 TIMP1P01033 207 aa21.98■■□□□ 1.11
UFD1-202ENST00000399523 MRPS5P82675 430 aaKnown RBP21.98■■□□□ 1.11
UFD1-202ENST00000399523 PLS1Q14651 629 aa21.98■■□□□ 1.11
UFD1-202ENST00000399523 KIAA1755Q5JYT7 1200 aa21.98■■□□□ 1.11
UFD1-202ENST00000399523 FAM122AQ96E09 287 aa21.98■■□□□ 1.11
UFD1-202ENST00000399523 PLXNA1Q9UIW2 1896 aa21.98■■□□□ 1.11
UFD1-202ENST00000399523 CHD7Q9P2D1 2997 aa21.97■■□□□ 1.11
UFD1-202ENST00000399523 DCDC2CA8MYV0 355 aa21.97■■□□□ 1.11
UFD1-202ENST00000399523 IDH1O75874 414 aaKnown RBP21.97■■□□□ 1.11
UFD1-202ENST00000399523 RASIP1Q5U651 963 aa21.97■■□□□ 1.11
UFD1-202ENST00000399523 TMED8Q6PL24 325 aaPredicted RBP21.97■■□□□ 1.11
UFD1-202ENST00000399523 MAGEB6Q8N7X4 407 aa21.97■■□□□ 1.11
UFD1-202ENST00000399523 PPM1EQ8WY54 764 aa21.97■■□□□ 1.11
UFD1-202ENST00000399523 TINF2Q9BSI4 451 aa21.97■■□□□ 1.11
UFD1-202ENST00000399523 PBX4Q9BYU1 374 aa21.97■■□□□ 1.11
UFD1-202ENST00000399523 PRDM12Q9H4Q4 367 aa21.97■■□□□ 1.11
UFD1-202ENST00000399523 DIS3Q9Y2L1 958 aaKnown RBP21.97■■□□□ 1.11
UFD1-202ENST00000399523 ADAMTS4O75173 837 aa21.96■■□□□ 1.11
UFD1-202ENST00000399523 SLC25A27O95847 323 aa21.96■■□□□ 1.11
UFD1-202ENST00000399523 ZNF865P0CJ78 1059 aaPredicted RBP21.96■■□□□ 1.11
UFD1-202ENST00000399523 TAL1P17542 331 aaPredicted RBP21.96■■□□□ 1.11
UFD1-202ENST00000399523 PBX2P40425 430 aa21.96■■□□□ 1.11
UFD1-202ENST00000399523 MFSD5Q6N075 450 aa21.96■■□□□ 1.11
UFD1-202ENST00000399523 C16orf59Q7L2K0 433 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms