RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 BSDC1Q9NW68 430 aaPredicted RBP16.54■□□□□ 0.24
CCDC144A-205ENST00000399264 RTL9Q8NET4 1388 aa16.54■□□□□ 0.24
CCDC144A-205ENST00000399264 XDHP47989 1333 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 PHLPP2Q6ZVD8 1323 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 CNTNAP5Q8WYK1 1306 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 UBE4AQ14139 1066 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 RAD9BQ6WBX8 426 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 SH3RF1Q7Z6J0 888 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 ELOA2Q8IYF1 753 aaPredicted RBP16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 PLCH1Q4KWH8 1693 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 A0A1B0GTH6 734 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 USP17L8P0C7I0 530 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 RASGRP2Q7LDG7 609 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 GTPBP4Q9BZE4 634 aaKnown RBP16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 FHOD1Q9Y613 1164 aa16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 COL16A1Q07092 1604 aaPredicted RBP16.53■□□□□ 0.24
CCDC144A-205ENST00000399264 TADA3O75528 432 aa16.52■□□□□ 0.24
CCDC144A-205ENST00000399264 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.24
CCDC144A-205ENST00000399264 UBXN4Q92575 508 aa16.52■□□□□ 0.24
CCDC144A-205ENST00000399264 BRIP1Q9BX63 1249 aa16.52■□□□□ 0.24
CCDC144A-205ENST00000399264 DUOX1Q9NRD9 1551 aa16.52■□□□□ 0.24
CCDC144A-205ENST00000399264 STX10O60499 249 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 XBP1P17861 261 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 KRT222Q8N1A0 295 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 STAG2Q8N3U4 1231 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 MNS1Q8NEH6 495 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 DYNLL2Q96FJ2 89 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 CTNND2Q9UQB3 1225 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 SYNRGQ9UMZ2 1314 aa16.52■□□□□ 0.23
CCDC144A-205ENST00000399264 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 ZSCAN12O43309 604 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 NLRP5P59047 1200 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 PLIN2Q99541 437 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 FAM53CQ9NYF3 392 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 FAM205AQ6ZU69 1335 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 PP2D1A8MPX8 630 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 RCAN1P53805 252 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 SF3B3Q15393 1217 aaKnown RBP16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 SPATA1Q5VX52 437 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 RCSD1Q6JBY9 416 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 FBXO33Q7Z6M2 555 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 TRIML1Q8N9V2 468 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 ERCC5P28715 1186 aaPredicted RBP16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 CASP14P31944 242 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 FXR1P51114 621 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 GRIK5Q16478 980 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 KANK3Q6NY19 840 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 KIFC2Q96AC6 838 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 EEF2KMTQ96G04 330 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 GPR101Q96P66 508 aaPredicted RBP16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 CPVLQ9H3G5 476 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 DACH1Q9UI36 760 aa16.51■□□□□ 0.23
CCDC144A-205ENST00000399264 FGRP09769 529 aa16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 CASQ1P31415 396 aa16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 ZNF771Q7L3S4 317 aaPredicted RBP16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 VPS16Q9H269 839 aa16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 AKR1B15C9JRZ8 316 aaPredicted RBP16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 E2F4Q16254 413 aa16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 CTCFLQ8NI51 663 aaPredicted RBP16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 GDAQ9Y2T3 454 aa16.5■□□□□ 0.23
CCDC144A-205ENST00000399264 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 MYO1BO43795 1136 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 SCG2P13521 617 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 SLC35G1Q2M3R5 365 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 CDKAL1Q5VV42 579 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 SLC44A5Q8NCS7 719 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 IL17RBQ9NRM6 502 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 ZNF652Q9Y2D9 606 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 CCP110O43303 1012 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 PNMA6AP0CW24 399 aaPredicted RBP16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 MAP3K9P80192 1104 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 TEX35Q5T0J7 233 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 RRAGBQ5VZM2 374 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
CCDC144A-205ENST00000399264 GYPCP04921 128 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 HIBADHP31937 336 aaKnown RBP16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 PBX1P40424 430 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 DHX8Q14562 1220 aaKnown RBP16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 PDXDC2PQ6P474 469 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 FERMT2Q96AC1 680 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 PLA2G4AP47712 749 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 TERF2Q15554 542 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 DIXDC1Q155Q3 683 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 FAM98CQ17RN3 349 aaKnown RBP16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 FCHSD1Q86WN1 690 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 ACRBPQ8NEB7 543 aa16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 CCDC12Q8WUD4 166 aaPredicted RBP16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 RBM28Q9NW13 759 aaKnown RBP16.48■□□□□ 0.23
CCDC144A-205ENST00000399264 TAB2Q9NYJ8 693 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms