RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ATRNO75882 1429 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 SYF2O95926 243 aaKnown RBP15.8■□□□□ 0.12
APOB-202ENST00000399256 FECHP22830 423 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 WTAPQ15007 396 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 TTF1Q15361 905 aaPredicted RBP15.8■□□□□ 0.12
APOB-202ENST00000399256 EARS2Q5JPH6 523 aaKnown RBP15.8■□□□□ 0.12
APOB-202ENST00000399256 WDR93Q6P2C0 686 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 CRACR2BQ8N4Y2 399 aaPredicted RBP15.8■□□□□ 0.12
APOB-202ENST00000399256 ISCA1Q9BUE6 129 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 CARD10Q9BWT7 1032 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 AATFQ9NY61 560 aaKnown RBP eCLIP15.8■□□□□ 0.125e-20■■■■■ 198.1
APOB-202ENST00000399256 TBC1D2BQ9UPU7 963 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 PLCH1Q4KWH8 1693 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 MYO5AQ9Y4I1 1855 aaKnown RBP15.79■□□□□ 0.12
APOB-202ENST00000399256 ITIH6Q6UXX5 1313 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 ZMYND10O75800 440 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 MBD4O95243 580 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 KRT9P35527 623 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 PHKA1P46020 1223 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 ARMT1Q9H993 441 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 FBXO3Q9UK99 471 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 hCG_1642624A0A1W2PR95 340 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 TRIM75PA6NK02 468 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 SRGAP2O75044 1071 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 CAPZA3Q96KX2 299 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 CNNM1Q9NRU3 951 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 TCRBV5S4A2TA0A5A2 114 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 WNT7AO00755 349 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 EVA1CP58658 441 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 RRAGBQ5VZM2 374 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 MFSD6Q6ZSS7 791 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 GSPT2Q8IYD1 628 aaKnown RBP15.79■□□□□ 0.12
APOB-202ENST00000399256 SHISA4Q96DD7 197 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 VPS54Q9P1Q0 977 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 MYO1AQ9UBC5 1043 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 RIPOR2Q9Y4F9 1068 aa15.79■□□□□ 0.12
APOB-202ENST00000399256 AKAP11Q9UKA4 1901 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 SEMA3EO15041 775 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 PRKAB2O43741 272 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 GTF2A1P52655 376 aaPredicted RBP15.78■□□□□ 0.12
APOB-202ENST00000399256 COPB1P53618 953 aaKnown RBP15.78■□□□□ 0.12
APOB-202ENST00000399256 USP14P54578 494 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 CORO7P57737 925 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 TCIRG1Q13488 830 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 AKNAD1Q5T1N1 836 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 MMS19Q96T76 1030 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 REXO2Q9Y3B8 237 aaKnown RBP15.78■□□□□ 0.12
APOB-202ENST00000399256 TUBBP07437 444 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 CT47A1Q5JQC4 288 aaPredicted RBP15.78■□□□□ 0.12
APOB-202ENST00000399256 ICE2Q659A1 982 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 CTR9Q6PD62 1173 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 GSDMAQ96QA5 445 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 GREM2Q9H772 168 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 HPCAL4Q9UM19 191 aa15.78■□□□□ 0.12
APOB-202ENST00000399256 PATL2C9JE40 543 aaKnown RBP15.77■□□□□ 0.12
APOB-202ENST00000399256 PRDM1O75626 825 aa15.77■□□□□ 0.12
APOB-202ENST00000399256 ITGA6P23229 1130 aa15.77■□□□□ 0.12
APOB-202ENST00000399256 MAGEB6Q8N7X4 407 aa15.77■□□□□ 0.12
APOB-202ENST00000399256 PRPF6O94906 941 aaKnown RBP15.77■□□□□ 0.11
APOB-202ENST00000399256 ATP1A1P05023 1023 aaKnown RBP15.77■□□□□ 0.11
APOB-202ENST00000399256 TRAPPC11Q7Z392 1133 aa15.77■□□□□ 0.11
APOB-202ENST00000399256 KRT23Q9C075 422 aa15.77■□□□□ 0.11
APOB-202ENST00000399256 LIMA1Q9UHB6 759 aaKnown RBP15.77■□□□□ 0.11
APOB-202ENST00000399256 MAPK8IP1Q9UQF2 711 aa15.77■□□□□ 0.11
APOB-202ENST00000399256 PPFIA4O75335 1185 aa15.77■□□□□ 0.11
APOB-202ENST00000399256 NDUFA10O95299 355 aa15.77■□□□□ 0.11
APOB-202ENST00000399256 ZNF174Q15697 407 aa15.77■□□□□ 0.11
APOB-202ENST00000399256 TTLL11Q8NHH1 800 aa15.77■□□□□ 0.11
APOB-202ENST00000399256 CNNM2Q9H8M5 875 aa15.77■□□□□ 0.11
APOB-202ENST00000399256 EPN1Q9Y6I3 576 aaPredicted RBP15.77■□□□□ 0.11
APOB-202ENST00000399256 NRAPQ86VF7 1730 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 ERICH2A1L162 156 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 CSF1RP07333 972 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 IRX3P78415 501 aaPredicted RBP15.76■□□□□ 0.11
APOB-202ENST00000399256 SART3Q15020 963 aaKnown RBP15.76■□□□□ 0.11
APOB-202ENST00000399256 FANCBQ8NB91 859 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 PPM1EQ8WY54 764 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 KCNJ18B7U540 433 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 ADAMTS2O95450 1211 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 TDO2P48775 406 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 AARSP49588 968 aaKnown RBP eCLIP15.76■□□□□ 0.11
APOB-202ENST00000399256 UBXN1Q04323 297 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 KCNJ12Q14500 433 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 ALX1Q15699 326 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 ZNF654Q8IZM8 581 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 CTCFLQ8NI51 663 aaPredicted RBP15.76■□□□□ 0.11
APOB-202ENST00000399256 VIPAS39Q9H9C1 493 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 JRKLQ9Y4A0 524 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 SHANK3Q9BYB0 1731 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 LRP6O75581 1613 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 XDHP47989 1333 aa15.76■□□□□ 0.11
APOB-202ENST00000399256 PCCAP05165 728 aaPredicted RBP15.75■□□□□ 0.11
APOB-202ENST00000399256 GPTP24298 496 aa15.75■□□□□ 0.11
APOB-202ENST00000399256 STIM1Q13586 685 aa15.75■□□□□ 0.11
APOB-202ENST00000399256 HELBQ8NG08 1087 aaPredicted RBP15.75■□□□□ 0.11
APOB-202ENST00000399256 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
APOB-202ENST00000399256 HINFPQ9BQA5 517 aa15.75■□□□□ 0.11
APOB-202ENST00000399256 GSG1L2A8MUP6 293 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms