RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 GOLPH3LQ9H4A5 285 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 TDRD3Q9H7E2 651 aaKnown RBP17.48■□□□□ 0.39
COL25A1-201ENST00000399126 PSMD14O00487 310 aa17.47■□□□□ 0.39
COL25A1-201ENST00000399126 GOLGA8HP0CJ92 632 aa17.47■□□□□ 0.39
COL25A1-201ENST00000399126 ME1P48163 572 aa17.47■□□□□ 0.39
COL25A1-201ENST00000399126 EIF6P56537 245 aaKnown RBP17.47■□□□□ 0.39
COL25A1-201ENST00000399126 ZNF287Q9HBT7 754 aa17.47■□□□□ 0.39
COL25A1-201ENST00000399126 BRCA1P38398 1863 aaKnown RBP17.47■□□□□ 0.39
COL25A1-201ENST00000399126 DDTLA6NHG4 134 aaPredicted RBP17.47■□□□□ 0.39
COL25A1-201ENST00000399126 PRPF3O43395 683 aaKnown RBP17.47■□□□□ 0.39
COL25A1-201ENST00000399126 AKAP17AQ02040 695 aaKnown RBP17.47■□□□□ 0.39
COL25A1-201ENST00000399126 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
COL25A1-201ENST00000399126 PRMT6Q96LA8 375 aaPredicted RBP17.47■□□□□ 0.39
COL25A1-201ENST00000399126 DNAJC18Q9H819 358 aa17.47■□□□□ 0.39
COL25A1-201ENST00000399126 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
COL25A1-201ENST00000399126 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
COL25A1-201ENST00000399126 PCDHA7Q9UN72 937 aa17.47■□□□□ 0.39
COL25A1-201ENST00000399126 POLD1P28340 1107 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 SHMT1P34896 483 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 CFAP100Q494V2 611 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 SH3BP5LQ7L8J4 393 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 RNF214Q8ND24 703 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 MAD2L2Q9UI95 211 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 ISY1Q9ULR0 285 aaKnown RBP17.46■□□□□ 0.39
COL25A1-201ENST00000399126 FAM205CA6NFA0 338 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 STK38Q15208 465 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 ANO1Q5XXA6 986 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 ATL3Q6DD88 541 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 POLR3EQ9NVU0 708 aa17.46■□□□□ 0.39
COL25A1-201ENST00000399126 ADAMTS3O15072 1205 aa17.45■□□□□ 0.38
COL25A1-201ENST00000399126 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
COL25A1-201ENST00000399126 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
COL25A1-201ENST00000399126 NOSTRINQ8IVI9 506 aa17.45■□□□□ 0.38
COL25A1-201ENST00000399126 MARCKSP29966 332 aaPredicted RBP17.45■□□□□ 0.38
COL25A1-201ENST00000399126 GRM4Q14833 912 aa17.45■□□□□ 0.38
COL25A1-201ENST00000399126 CCAR1Q8IX12 1150 aaKnown RBP17.45■□□□□ 0.38
COL25A1-201ENST00000399126 MRIQ9BWK5 157 aa17.45■□□□□ 0.38
COL25A1-201ENST00000399126 CYTH3O43739 400 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 TGFB2P61812 414 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 HDLBPQ00341 1268 aaKnown RBP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 TOB1P50616 345 aaPredicted RBP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 RSBN1LQ6PCB5 846 aaPredicted RBP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 USP17L2Q6R6M4 530 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 SPTLC2O15270 562 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 NPY5RQ15761 445 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 DALRD3Q5D0E6 543 aaKnown RBP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 CKAP2LQ8IYA6 745 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 LRRC47Q8N1G4 583 aaKnown RBP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.38
COL25A1-201ENST00000399126 MAP3K14Q99558 947 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 SGIP1Q9BQI5 828 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 PHF20Q9BVI0 1012 aa17.44■□□□□ 0.38
COL25A1-201ENST00000399126 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.43■□□□□ 0.38
COL25A1-201ENST00000399126 KIF5BP33176 963 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 SAFBQ15424 915 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL25A1-201ENST00000399126 UTP14CQ5TAP6 766 aaKnown RBP17.43■□□□□ 0.38
COL25A1-201ENST00000399126 IDI2Q9BXS1 227 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 NUP62CLQ9H1M0 184 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 TSPY26PQ9H489 355 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 FER1L6Q2WGJ9 1857 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 YEATS4O95619 227 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 NT5C2P49902 561 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 PTPAQ15257 358 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 PIAS4Q8N2W9 510 aaPredicted RBP17.43■□□□□ 0.38
COL25A1-201ENST00000399126 GMLQ99445 158 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 MTMR4Q9NYA4 1195 aa17.43■□□□□ 0.38
COL25A1-201ENST00000399126 A0A1B0GVL5 298 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 CLRN2A0PK11 232 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 HLA-DOAP06340 250 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 VIL1P09327 827 aaKnown RBP17.42■□□□□ 0.38
COL25A1-201ENST00000399126 SCG2P13521 617 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 ATP2B1P20020 1258 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 FAM193AP78312 1265 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 CCDC178Q5BJE1 867 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 FSIP1Q8NA03 581 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 FOXP1Q9H334 677 aaPredicted RBP17.42■□□□□ 0.38
COL25A1-201ENST00000399126 PLIN4Q96Q06 1357 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
COL25A1-201ENST00000399126 MPHOSPH10O00566 681 aaKnown RBP17.42■□□□□ 0.38
COL25A1-201ENST00000399126 SNW1Q13573 536 aaKnown RBP17.42■□□□□ 0.38
COL25A1-201ENST00000399126 TYW1BQ6NUM6 668 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 CABP5Q9NP86 173 aa17.42■□□□□ 0.38
COL25A1-201ENST00000399126 IGKV6D-41A0A0C4DH26 115 aa17.41■□□□□ 0.38
COL25A1-201ENST00000399126 SHTN1A0MZ66 631 aa17.41■□□□□ 0.38
COL25A1-201ENST00000399126 USP17L5A8MUK1 530 aa17.41■□□□□ 0.38
COL25A1-201ENST00000399126 NFKBIEO00221 500 aa17.41■□□□□ 0.38
COL25A1-201ENST00000399126 NOVP48745 357 aa17.41■□□□□ 0.38
COL25A1-201ENST00000399126 SLC39A14Q15043 492 aa17.41■□□□□ 0.38
COL25A1-201ENST00000399126 PFKFB3Q16875 520 aaPredicted RBP17.41■□□□□ 0.38
COL25A1-201ENST00000399126 AXDND1Q5T1B0 1012 aaPredicted RBP17.41■□□□□ 0.38
COL25A1-201ENST00000399126 KCNG4Q8TDN1 519 aa17.41■□□□□ 0.38
COL25A1-201ENST00000399126 UPF1Q92900 1129 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL25A1-201ENST00000399126 FUCA2Q9BTY2 467 aa17.41■□□□□ 0.38
COL25A1-201ENST00000399126 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
COL25A1-201ENST00000399126 MYH4Q9Y623 1939 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms