RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 IL17RBQ9NRM6 502 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 LRRC4BQ9NT99 713 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 WNT7AO00755 349 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 TRAPPC10P48553 1259 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 ST5P78524 1137 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 ZNF174Q15697 407 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 CCDC178Q5BJE1 867 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 NYAP1Q6ZVC0 841 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 CERS3Q8IU89 383 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 CERKQ8TCT0 537 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 DPF2Q92785 391 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 SYMPKQ92797 1274 aaKnown RBP15.8■□□□□ 0.12
PRAME-202ENST00000398743 DYNLL2Q96FJ2 89 aa15.8■□□□□ 0.12
PRAME-202ENST00000398743 SLFN14P0C7P3 912 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 KCNJ6P48051 423 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 GPSM2P81274 684 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 ATP2C1P98194 919 aaPredicted RBP15.79■□□□□ 0.12
PRAME-202ENST00000398743 GRIK5Q16478 980 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 CRY2Q49AN0 593 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 NOM1Q5C9Z4 860 aaKnown RBP15.79■□□□□ 0.12
PRAME-202ENST00000398743 PIK3AP1Q6ZUJ8 805 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 ENOX1Q8TC92 643 aaKnown RBP15.79■□□□□ 0.12
PRAME-202ENST00000398743 TGFBRAP1Q8WUH2 860 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 ANKS1AQ92625 1134 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 GPR101Q96P66 508 aaPredicted RBP15.79■□□□□ 0.12
PRAME-202ENST00000398743 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
PRAME-202ENST00000398743 TRMT1Q9NXH9 659 aaKnown RBP15.79■□□□□ 0.12
PRAME-202ENST00000398743 A0A087X0B3 334 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 CTIFO43310 598 aaKnown RBP15.79■□□□□ 0.12
PRAME-202ENST00000398743 UFL1O94874 794 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 TSPY3P0CV98 308 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 TSPY8P0CW00 308 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 CALML3P27482 149 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 PTGDRQ13258 359 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 ZNF827Q17R98 1081 aa15.79■□□□□ 0.12
PRAME-202ENST00000398743 ATP2B4P23634 1241 aa15.78■□□□□ 0.12
PRAME-202ENST00000398743 FMR1Q06787 632 aaKnown RBP eCLIP15.78■□□□□ 0.126e-14■□□□□ 9.2
PRAME-202ENST00000398743 VSTM4Q8IW00 320 aa15.78■□□□□ 0.12
PRAME-202ENST00000398743 CCDC112Q8NEF3 446 aa15.78■□□□□ 0.12
PRAME-202ENST00000398743 RTFDC1Q9BY42 306 aaPredicted RBP15.78■□□□□ 0.12
PRAME-202ENST00000398743 CD209Q9NNX6 404 aa15.78■□□□□ 0.12
PRAME-202ENST00000398743 TCP11L1Q9NUJ3 509 aa15.78■□□□□ 0.12
PRAME-202ENST00000398743 NFE2L3Q9Y4A8 694 aa15.78■□□□□ 0.12
PRAME-202ENST00000398743 VWA3AA6NCI4 1184 aa15.77■□□□□ 0.12
PRAME-202ENST00000398743 ONECUT3O60422 494 aaPredicted RBP15.77■□□□□ 0.12
PRAME-202ENST00000398743 GYS1P13807 737 aa15.77■□□□□ 0.12
PRAME-202ENST00000398743 GNAQP50148 359 aa15.77■□□□□ 0.12
PRAME-202ENST00000398743 SEPT12Q8IYM1 358 aa15.77■□□□□ 0.12
PRAME-202ENST00000398743 ZNF444Q8N0Y2 327 aaPredicted RBP15.77■□□□□ 0.12
PRAME-202ENST00000398743 ZNF710Q8N1W2 664 aa15.77■□□□□ 0.12
PRAME-202ENST00000398743 ZNF592Q92610 1267 aa15.77■□□□□ 0.12
PRAME-202ENST00000398743 RBM17Q96I25 401 aaKnown RBP15.77■□□□□ 0.12
PRAME-202ENST00000398743 SH3GLB2Q9NR46 395 aa15.77■□□□□ 0.12
PRAME-202ENST00000398743 GGA1Q9UJY5 639 aa15.77■□□□□ 0.12
PRAME-202ENST00000398743 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.11
PRAME-202ENST00000398743 VEGFAP15692 232 aaPredicted RBP15.77■□□□□ 0.11
PRAME-202ENST00000398743 PLCD1P51178 756 aa15.77■□□□□ 0.11
PRAME-202ENST00000398743 GRM4Q14833 912 aa15.77■□□□□ 0.11
PRAME-202ENST00000398743 CT47A1Q5JQC4 288 aaPredicted RBP15.77■□□□□ 0.11
PRAME-202ENST00000398743 E4F1Q66K89 784 aaPredicted RBP15.77■□□□□ 0.11
PRAME-202ENST00000398743 SH3RF1Q7Z6J0 888 aa15.77■□□□□ 0.11
PRAME-202ENST00000398743 PAGE5Q96GU1 130 aa15.77■□□□□ 0.11
PRAME-202ENST00000398743 ZNF287Q9HBT7 754 aa15.77■□□□□ 0.11
PRAME-202ENST00000398743 PSDA5PKW4 1024 aaPredicted RBP15.76■□□□□ 0.11
PRAME-202ENST00000398743 USP17L3A6NCW0 530 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 USP17L4A6NCW7 530 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 KIF2AO00139 706 aaPredicted RBP15.76■□□□□ 0.11
PRAME-202ENST00000398743 SERPINB2P05120 415 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 IL1R1P14778 569 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 ZNF18P17022 549 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 CDK11BP21127 795 aaKnown RBP15.76■□□□□ 0.11
PRAME-202ENST00000398743 ERCC5P28715 1186 aaPredicted RBP15.76■□□□□ 0.11
PRAME-202ENST00000398743 BTDP43251 543 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 AFMP43652 599 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 USP17L1Q7RTZ2 530 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 MAPKAPK5Q8IW41 473 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 BLIDQ8IZY5 108 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 UBE2Q2Q8WVN8 375 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 MAD2L2Q9UI95 211 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 AFF2P51816 1311 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 TRMT44Q8IYL2 757 aaKnown RBP15.76■□□□□ 0.11
PRAME-202ENST00000398743 STAG2Q8N3U4 1231 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 PYM1Q9BRP8 204 aaKnown RBP15.76■□□□□ 0.11
PRAME-202ENST00000398743 STX8Q9UNK0 236 aa15.76■□□□□ 0.11
PRAME-202ENST00000398743 TMEM232C9JQI7 657 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 MCM7P33993 719 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 HSP90AA4PQ58FG1 418 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 GPKOWQ92917 476 aaPredicted RBP eCLIP15.75■□□□□ 0.11
PRAME-202ENST00000398743 GSDMAQ96QA5 445 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 SAP30BPQ9UHR5 308 aaKnown RBP15.75■□□□□ 0.11
PRAME-202ENST00000398743 PCDHA4Q9UN74 947 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 NAV1Q8NEY1 1877 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 GPR75-ASB3A0A0A6YYF3 556 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 BBOX1O75936 387 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 DPYDQ12882 1025 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 IQUBQ8NA54 791 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 PPP1R13BQ96KQ4 1090 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 INTS13Q9NVM9 706 aa15.75■□□□□ 0.11
PRAME-202ENST00000398743 TRPC5Q9UL62 973 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms